Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 AF106564.1-201ENST00000607058 2553 ntBASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 HNRNPDP1-201ENST00000439535 754 ntBASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 AC096582.2-201ENST00000510860 516 ntBASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ZC3H4Q9UPT8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC22.56■■□□□ 1.2
ZC3H4Q9UPT8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
ZC3H4Q9UPT8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZC3H4Q9UPT8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
ZC3H4Q9UPT8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZC3H4Q9UPT8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZC3H4Q9UPT8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZC3H4Q9UPT8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC22.56■■□□□ 1.2
ZC3H4Q9UPT8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
ZC3H4Q9UPT8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
ZC3H4Q9UPT8 AC132008.2-207ENST00000454517 770 ntBASIC22.56■■□□□ 1.2
ZC3H4Q9UPT8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC22.56■■□□□ 1.2
ZC3H4Q9UPT8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.56■■□□□ 1.2
ZC3H4Q9UPT8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.56■■□□□ 1.2
ZC3H4Q9UPT8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ZC3H4Q9UPT8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 ZNF815P-204ENST00000434898 1737 ntBASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 AC034105.1-201ENST00000563488 319 ntBASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ZC3H4Q9UPT8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.54■■□□□ 1.2
ZC3H4Q9UPT8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 PAN3-AS1-201ENST00000563843 1351 ntBASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.53■■□□□ 1.2
ZC3H4Q9UPT8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms