Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 MIR3180-4-201ENST00000582223 153 ntBASIC19.74■□□□□ 0.75
CDH9Q9ULB4 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.74■□□□□ 0.75
CDH9Q9ULB4 AL157888.1-201ENST00000631930 593 ntBASIC19.74■□□□□ 0.75
CDH9Q9ULB4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDH9Q9ULB4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 LINC01311-201ENST00000565162 1445 ntBASIC19.73■□□□□ 0.75
CDH9Q9ULB4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH9Q9ULB4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 AP000593.1-201ENST00000393668 712 ntBASIC19.72■□□□□ 0.75
CDH9Q9ULB4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 AC083849.1-201ENST00000615227 514 ntBASIC19.72■□□□□ 0.75
CDH9Q9ULB4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH9Q9ULB4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.71■□□□□ 0.75
CDH9Q9ULB4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 HBZP1-201ENST00000354915 429 ntBASIC19.71■□□□□ 0.75
CDH9Q9ULB4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 FAM86EP-206ENST00000510506 987 ntBASIC19.71■□□□□ 0.75
CDH9Q9ULB4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 ZNF444P1-201ENST00000559497 298 ntBASIC19.71■□□□□ 0.75
CDH9Q9ULB4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDH9Q9ULB4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms