Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
STAG3Q9UJ98 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC26.77■■□□□ 1.88
STAG3Q9UJ98 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
STAG3Q9UJ98 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
STAG3Q9UJ98 AC093909.1-201ENST00000504731 1122 ntBASIC26.77■■□□□ 1.88
STAG3Q9UJ98 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC26.77■■□□□ 1.88
STAG3Q9UJ98 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC26.77■■□□□ 1.88
STAG3Q9UJ98 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
STAG3Q9UJ98 AL137060.1-201ENST00000618151 2648 ntBASIC26.77■■□□□ 1.88
STAG3Q9UJ98 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
STAG3Q9UJ98 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
STAG3Q9UJ98 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
STAG3Q9UJ98 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC26.76■■□□□ 1.88
STAG3Q9UJ98 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC26.76■■□□□ 1.88
STAG3Q9UJ98 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 CYP51A1P1-201ENST00000492267 1507 ntBASIC26.76■■□□□ 1.87
STAG3Q9UJ98 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 EMD-201ENST00000369835 966 ntTSL 3 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 MIR1233-2-201ENST00000408138 82 ntBASIC26.76■■□□□ 1.87
STAG3Q9UJ98 MIR1233-1-201ENST00000408722 82 ntBASIC26.76■■□□□ 1.87
STAG3Q9UJ98 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 POLD2P1-201ENST00000511220 997 ntBASIC26.76■■□□□ 1.87
STAG3Q9UJ98 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 IRF8-202ENST00000562492 946 ntTSL 3 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 AC148477.8-201ENST00000624298 468 ntBASIC26.76■■□□□ 1.87
STAG3Q9UJ98 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
STAG3Q9UJ98 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC26.75■■□□□ 1.87
STAG3Q9UJ98 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
STAG3Q9UJ98 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
STAG3Q9UJ98 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC26.75■■□□□ 1.87
STAG3Q9UJ98 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC26.75■■□□□ 1.87
STAG3Q9UJ98 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC26.75■■□□□ 1.87
STAG3Q9UJ98 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC26.75■■□□□ 1.87
STAG3Q9UJ98 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
STAG3Q9UJ98 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
STAG3Q9UJ98 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC26.75■■□□□ 1.87
STAG3Q9UJ98 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
STAG3Q9UJ98 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC26.75■■□□□ 1.87
STAG3Q9UJ98 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC26.75■■□□□ 1.87
STAG3Q9UJ98 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 AC112907.3-201ENST00000577781 2400 ntBASIC26.74■■□□□ 1.87
STAG3Q9UJ98 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 MIR5100-201ENST00000579544 119 ntBASIC26.74■■□□□ 1.87
STAG3Q9UJ98 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC26.74■■□□□ 1.87
STAG3Q9UJ98 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
STAG3Q9UJ98 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
STAG3Q9UJ98 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
STAG3Q9UJ98 RNPS1P1-201ENST00000507437 918 ntBASIC26.73■■□□□ 1.87
STAG3Q9UJ98 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
STAG3Q9UJ98 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
STAG3Q9UJ98 AC009065.1-201ENST00000564055 1225 ntBASIC26.73■■□□□ 1.87
STAG3Q9UJ98 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
STAG3Q9UJ98 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC26.73■■□□□ 1.87
STAG3Q9UJ98 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC26.73■■□□□ 1.87
STAG3Q9UJ98 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC26.73■■□□□ 1.87
STAG3Q9UJ98 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
STAG3Q9UJ98 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
STAG3Q9UJ98 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
STAG3Q9UJ98 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
STAG3Q9UJ98 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
STAG3Q9UJ98 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms