Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 AC008622.2-201ENST00000617006 1229 ntBASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PPARGC1AQ9UBK2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 AL049812.1-201ENST00000432563 2267 ntBASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 INGX-201ENST00000359239 846 ntBASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPARGC1AQ9UBK2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 AP003041.3-201ENST00000527151 707 ntBASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 LINC01023-201ENST00000606054 436 ntBASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 AL512353.2-201ENST00000448759 1962 ntBASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.44■□□□□ 0.7
PPARGC1AQ9UBK2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 KRT8P32-201ENST00000512863 1461 ntBASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 FAM87A-204ENST00000613235 858 ntBASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PPARGC1AQ9UBK2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PPARGC1AQ9UBK2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms