Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCKIPSDQ9NZQ3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCKIPSDQ9NZQ3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.9■□□□□ 0.62
NCKIPSDQ9NZQ3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NCKIPSDQ9NZQ3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NCKIPSDQ9NZQ3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.89■□□□□ 0.62
NCKIPSDQ9NZQ3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NCKIPSDQ9NZQ3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 AK4P3-201ENST00000418260 669 ntBASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 TSPY17P-201ENST00000450329 467 ntBASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 Z98044.1-201ENST00000632503 1764 ntBASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 IRX1P1-201ENST00000438849 1838 ntBASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 HCG11-201ENST00000411553 5696 ntBASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 FP475955.4-201ENST00000623131 1990 ntBASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
NCKIPSDQ9NZQ3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 AL031598.1-201ENST00000561511 1773 ntBASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 AC006011.2-201ENST00000621313 1158 ntBASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 AC093525.10-201ENST00000625130 1569 ntBASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
NCKIPSDQ9NZQ3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.86■□□□□ 0.61
NCKIPSDQ9NZQ3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKIPSDQ9NZQ3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.86■□□□□ 0.61
NCKIPSDQ9NZQ3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NCKIPSDQ9NZQ3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKIPSDQ9NZQ3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKIPSDQ9NZQ3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCKIPSDQ9NZQ3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms