Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
A1CFQ9NQ94 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
A1CFQ9NQ94 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.27■■□□□ 1
A1CFQ9NQ94 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
A1CFQ9NQ94 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.27■■□□□ 1
A1CFQ9NQ94 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.27■■□□□ 1
A1CFQ9NQ94 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
A1CFQ9NQ94 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
A1CFQ9NQ94 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
A1CFQ9NQ94 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.27■■□□□ 1
A1CFQ9NQ94 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
A1CFQ9NQ94 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
A1CFQ9NQ94 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.27■■□□□ 1
A1CFQ9NQ94 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.27■■□□□ 1
A1CFQ9NQ94 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
A1CFQ9NQ94 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.27■■□□□ 1
A1CFQ9NQ94 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.27■■□□□ 1
A1CFQ9NQ94 AC068587.9-201ENST00000641814 219 ntBASIC21.27■■□□□ 1
A1CFQ9NQ94 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
A1CFQ9NQ94 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
A1CFQ9NQ94 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.27■■□□□ 1
A1CFQ9NQ94 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
A1CFQ9NQ94 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.27■■□□□ 1
A1CFQ9NQ94 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
A1CFQ9NQ94 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.27■■□□□ 1
A1CFQ9NQ94 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.27■■□□□ 1
A1CFQ9NQ94 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.27■□□□□ 0.99
A1CFQ9NQ94 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 AC093484.2-201ENST00000580996 2166 ntBASIC21.26■□□□□ 0.99
A1CFQ9NQ94 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 AP002414.4-201ENST00000589764 1148 ntBASIC21.26■□□□□ 0.99
A1CFQ9NQ94 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
A1CFQ9NQ94 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 AC087289.5-201ENST00000586076 3175 ntBASIC21.25■□□□□ 0.99
A1CFQ9NQ94 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 TSPY22P-201ENST00000427496 604 ntBASIC21.25■□□□□ 0.99
A1CFQ9NQ94 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
A1CFQ9NQ94 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 CHCHD2P8-201ENST00000429873 447 ntBASIC21.24■□□□□ 0.99
A1CFQ9NQ94 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 MIR3652-201ENST00000579335 131 ntBASIC21.24■□□□□ 0.99
A1CFQ9NQ94 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.24■□□□□ 0.99
A1CFQ9NQ94 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms