Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 AL691403.2-201ENST00000618460 490 ntBASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 FAM215A-202ENST00000632077 792 ntBASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 AIRN-201ENST00000601203 4374 ntBASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.31■■□□□ 1
ZFYVE28Q9HCC9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 RPS2P28-201ENST00000314255 741 ntBASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZFYVE28Q9HCC9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 TREX1-205ENST00000625293 1783 ntBASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 KRT8P32-201ENST00000512863 1461 ntBASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 SCARNA2-201ENST00000458748 420 ntBASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 AL355877.3-201ENST00000622820 899 ntBASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.29■■□□□ 1
ZFYVE28Q9HCC9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 AC116407.3-201ENST00000623905 1129 ntBASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 Z82202.1-201ENST00000623446 1880 ntBASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms