Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 AC092473.1-201ENST00000441098 221 ntBASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 AC006518.1-201ENST00000541449 943 ntBASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 C1QL1P1-201ENST00000568105 661 ntBASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 AC083880.1-201ENST00000608266 535 ntBASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 CEP83-AS1-201ENST00000623122 2482 ntBASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 KRT8P45-201ENST00000414328 1447 ntBASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 AC112777.1-201ENST00000540175 1423 ntBASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 AC009053.2-201ENST00000563701 2365 ntBASIC9.48□□□□□ -0.89
KRTAP3-1Q9BYR8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 PRORSD1P-202ENST00000563365 2154 ntBASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 PCDHA12-202ENST00000613593 2588 ntBASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 SEC63P1-201ENST00000425785 1258 ntBASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 TSPY6P-201ENST00000448518 926 ntBASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 Z85996.1-201ENST00000494644 937 ntBASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 AP001542.1-201ENST00000591314 200 ntBASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 AC080080.1-201ENST00000625121 2420 ntBASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 KRT8P11-201ENST00000409686 1436 ntBASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
KRTAP3-1Q9BYR8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms