Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 AL121672.3-201ENST00000608644 468 ntBASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 AC093525.10-201ENST00000625130 1569 ntBASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PAAF1Q9BRP4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PAAF1Q9BRP4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PAAF1Q9BRP4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.89■□□□□ 0.77
PAAF1Q9BRP4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PAAF1Q9BRP4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PAAF1Q9BRP4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PAAF1Q9BRP4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.89■□□□□ 0.77
PAAF1Q9BRP4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PAAF1Q9BRP4 TSPY22P-201ENST00000427496 604 ntBASIC19.89■□□□□ 0.77
PAAF1Q9BRP4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PAAF1Q9BRP4 PVRIG2P-201ENST00000435460 978 ntBASIC19.89■□□□□ 0.77
PAAF1Q9BRP4 KRT8P26-201ENST00000534154 1276 ntBASIC19.89■□□□□ 0.77
PAAF1Q9BRP4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.89■□□□□ 0.77
PAAF1Q9BRP4 KRT8P50-201ENST00000562022 1438 ntBASIC19.89■□□□□ 0.77
PAAF1Q9BRP4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 AP002414.4-201ENST00000589764 1148 ntBASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 AC092329.2-201ENST00000598402 547 ntBASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PAAF1Q9BRP4 Z83836.1-201ENST00000624605 1642 ntBASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms