Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.92■□□□□ 0.78
RAD9AQ99638 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAD9AQ99638 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAD9AQ99638 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAD9AQ99638 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAD9AQ99638 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAD9AQ99638 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAD9AQ99638 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.92■□□□□ 0.78
RAD9AQ99638 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.92■□□□□ 0.78
RAD9AQ99638 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAD9AQ99638 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.91■□□□□ 0.78
RAD9AQ99638 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.91■□□□□ 0.78
RAD9AQ99638 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAD9AQ99638 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAD9AQ99638 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.91■□□□□ 0.78
RAD9AQ99638 TEX21P-204ENST00000641479 1693 ntBASIC19.91■□□□□ 0.78
RAD9AQ99638 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAD9AQ99638 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAD9AQ99638 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAD9AQ99638 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAD9AQ99638 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAD9AQ99638 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
RAD9AQ99638 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.91■□□□□ 0.78
RAD9AQ99638 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.91■□□□□ 0.78
RAD9AQ99638 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.91■□□□□ 0.78
RAD9AQ99638 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.91■□□□□ 0.78
RAD9AQ99638 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAD9AQ99638 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAD9AQ99638 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAD9AQ99638 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAD9AQ99638 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAD9AQ99638 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RAD9AQ99638 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAD9AQ99638 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RAD9AQ99638 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.9■□□□□ 0.78
RAD9AQ99638 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAD9AQ99638 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.9■□□□□ 0.78
RAD9AQ99638 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAD9AQ99638 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.9■□□□□ 0.78
RAD9AQ99638 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RAD9AQ99638 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.9■□□□□ 0.78
RAD9AQ99638 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.9■□□□□ 0.78
RAD9AQ99638 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAD9AQ99638 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RAD9AQ99638 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAD9AQ99638 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.9■□□□□ 0.78
RAD9AQ99638 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAD9AQ99638 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAD9AQ99638 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.9■□□□□ 0.78
RAD9AQ99638 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
RAD9AQ99638 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RAD9AQ99638 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAD9AQ99638 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAD9AQ99638 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAD9AQ99638 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
RAD9AQ99638 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.89■□□□□ 0.77
RAD9AQ99638 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAD9AQ99638 MIR1233-2-201ENST00000408138 82 ntBASIC19.89■□□□□ 0.77
RAD9AQ99638 MIR1233-1-201ENST00000408722 82 ntBASIC19.89■□□□□ 0.77
RAD9AQ99638 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAD9AQ99638 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.89■□□□□ 0.77
RAD9AQ99638 PMS2P7-201ENST00000506558 1336 ntBASIC19.89■□□□□ 0.77
RAD9AQ99638 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.89■□□□□ 0.77
RAD9AQ99638 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RAD9AQ99638 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.89■□□□□ 0.77
RAD9AQ99638 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RAD9AQ99638 BNIP3P18-201ENST00000593976 575 ntBASIC19.89■□□□□ 0.77
RAD9AQ99638 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.89■□□□□ 0.77
RAD9AQ99638 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.89■□□□□ 0.77
RAD9AQ99638 AC148477.8-201ENST00000624298 468 ntBASIC19.89■□□□□ 0.77
RAD9AQ99638 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAD9AQ99638 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAD9AQ99638 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAD9AQ99638 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RAD9AQ99638 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAD9AQ99638 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAD9AQ99638 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.88■□□□□ 0.77
RAD9AQ99638 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAD9AQ99638 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RAD9AQ99638 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
RAD9AQ99638 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAD9AQ99638 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAD9AQ99638 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.88■□□□□ 0.77
RAD9AQ99638 POLD2P1-201ENST00000511220 997 ntBASIC19.88■□□□□ 0.77
RAD9AQ99638 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.88■□□□□ 0.77
RAD9AQ99638 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.88■□□□□ 0.77
RAD9AQ99638 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.88■□□□□ 0.77
RAD9AQ99638 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
RAD9AQ99638 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.88■□□□□ 0.77
RAD9AQ99638 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RAD9AQ99638 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.88■□□□□ 0.77
RAD9AQ99638 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAD9AQ99638 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.88■□□□□ 0.77
RAD9AQ99638 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAD9AQ99638 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.87■□□□□ 0.77
RAD9AQ99638 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAD9AQ99638 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAD9AQ99638 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAD9AQ99638 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAD9AQ99638 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms