Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 AC010240.3-201ENST00000607688 395 ntBASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP1Q96SZ6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 LINC01311-201ENST00000565162 1445 ntBASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP1Q96SZ6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 AL049812.1-201ENST00000432563 2267 ntBASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CDK5RAP1Q96SZ6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 ZNF444P1-201ENST00000559497 298 ntBASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 AL136038.3-201ENST00000561909 1096 ntBASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 HYMAI.1-201ENST00000620949 238 ntBASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDK5RAP1Q96SZ6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms