Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 AL357033.4-201ENST00000617703 1807 ntBASIC19.25■□□□□ 0.67
RPRD1AQ96P16 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 MTMR9LP-203ENST00000426597 1545 ntBASIC19.25■□□□□ 0.67
RPRD1AQ96P16 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPRD1AQ96P16 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.24■□□□□ 0.67
RPRD1AQ96P16 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 RNF165-205ENST00000588679 2904 ntBASIC19.24■□□□□ 0.67
RPRD1AQ96P16 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 AL441883.1-201ENST00000566170 1045 ntBASIC19.24■□□□□ 0.67
RPRD1AQ96P16 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPRD1AQ96P16 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RPRD1AQ96P16 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RPRD1AQ96P16 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPRD1AQ96P16 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPRD1AQ96P16 TSPY5P-201ENST00000426936 936 ntBASIC19.23■□□□□ 0.67
RPRD1AQ96P16 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RPRD1AQ96P16 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.23■□□□□ 0.67
RPRD1AQ96P16 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPRD1AQ96P16 AC024243.1-201ENST00000609234 778 ntBASIC19.23■□□□□ 0.67
RPRD1AQ96P16 AC010331.1-201ENST00000611423 582 ntBASIC19.23■□□□□ 0.67
RPRD1AQ96P16 AC112497.1-201ENST00000624824 639 ntBASIC19.23■□□□□ 0.67
RPRD1AQ96P16 AP000974.1-201ENST00000623909 2387 ntBASIC19.23■□□□□ 0.67
RPRD1AQ96P16 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPRD1AQ96P16 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.23■□□□□ 0.67
RPRD1AQ96P16 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPRD1AQ96P16 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPRD1AQ96P16 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPRD1AQ96P16 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RPRD1AQ96P16 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.23■□□□□ 0.67
RPRD1AQ96P16 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPRD1AQ96P16 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 AC034236.2-201ENST00000606662 1610 ntBASIC19.22■□□□□ 0.67
RPRD1AQ96P16 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 Z98044.1-201ENST00000632503 1764 ntBASIC19.22■□□□□ 0.67
RPRD1AQ96P16 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.22■□□□□ 0.67
RPRD1AQ96P16 KRT18P23-201ENST00000435622 1283 ntBASIC19.22■□□□□ 0.67
RPRD1AQ96P16 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 GCSHP2-201ENST00000560971 527 ntBASIC19.22■□□□□ 0.67
RPRD1AQ96P16 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPRD1AQ96P16 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.21■□□□□ 0.67
RPRD1AQ96P16 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms