Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 FP475955.4-201ENST00000623131 1990 ntBASIC18.72■□□□□ 0.59
SIPA1Q96FS4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 AC034236.2-201ENST00000606662 1610 ntBASIC18.72■□□□□ 0.59
SIPA1Q96FS4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 CHCHD2P8-201ENST00000429873 447 ntBASIC18.72■□□□□ 0.59
SIPA1Q96FS4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 AC141586.3-201ENST00000562166 1838 ntBASIC18.71■□□□□ 0.59
SIPA1Q96FS4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 KRT18P1-202ENST00000452408 1331 ntBASIC18.71■□□□□ 0.59
SIPA1Q96FS4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.71■□□□□ 0.59
SIPA1Q96FS4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SIPA1Q96FS4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
SIPA1Q96FS4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
SIPA1Q96FS4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
SIPA1Q96FS4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SIPA1Q96FS4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms