Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF34Q969K3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RNF34Q969K3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF34Q969K3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF34Q969K3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF34Q969K3 AL137013.1-201ENST00000432946 1228 ntBASIC19.54■□□□□ 0.72
RNF34Q969K3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RNF34Q969K3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF34Q969K3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF34Q969K3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF34Q969K3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF34Q969K3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RNF34Q969K3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF34Q969K3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF34Q969K3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF34Q969K3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF34Q969K3 KRT8P32-201ENST00000512863 1461 ntBASIC19.54■□□□□ 0.72
RNF34Q969K3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF34Q969K3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF34Q969K3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF34Q969K3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF34Q969K3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF34Q969K3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF34Q969K3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.53■□□□□ 0.72
RNF34Q969K3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RNF34Q969K3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF34Q969K3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
RNF34Q969K3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF34Q969K3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF34Q969K3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RNF34Q969K3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF34Q969K3 AL512604.3-201ENST00000569583 964 ntBASIC19.53■□□□□ 0.72
RNF34Q969K3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF34Q969K3 MIR4674-201ENST00000582457 87 ntBASIC19.53■□□□□ 0.72
RNF34Q969K3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF34Q969K3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF34Q969K3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF34Q969K3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RNF34Q969K3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF34Q969K3 AC006333.2-201ENST00000607957 2099 ntBASIC19.53■□□□□ 0.72
RNF34Q969K3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RNF34Q969K3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF34Q969K3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF34Q969K3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF34Q969K3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF34Q969K3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF34Q969K3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF34Q969K3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF34Q969K3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF34Q969K3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF34Q969K3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF34Q969K3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF34Q969K3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF34Q969K3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF34Q969K3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF34Q969K3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF34Q969K3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF34Q969K3 AC018445.3-201ENST00000624177 1945 ntBASIC19.52■□□□□ 0.72
RNF34Q969K3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RNF34Q969K3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RNF34Q969K3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF34Q969K3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF34Q969K3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.52■□□□□ 0.71
RNF34Q969K3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.52■□□□□ 0.71
RNF34Q969K3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF34Q969K3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
RNF34Q969K3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
RNF34Q969K3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF34Q969K3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
RNF34Q969K3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF34Q969K3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF34Q969K3 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF34Q969K3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF34Q969K3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF34Q969K3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF34Q969K3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF34Q969K3 AC005521.1-201ENST00000393351 872 ntBASIC19.51■□□□□ 0.71
RNF34Q969K3 AC113347.1-201ENST00000413321 391 ntBASIC19.51■□□□□ 0.71
RNF34Q969K3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF34Q969K3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF34Q969K3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
RNF34Q969K3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RNF34Q969K3 AC083906.6-201ENST00000641366 219 ntBASIC19.51■□□□□ 0.71
RNF34Q969K3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF34Q969K3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF34Q969K3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF34Q969K3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RNF34Q969K3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF34Q969K3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF34Q969K3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF34Q969K3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF34Q969K3 AC008556.1-201ENST00000610908 2040 ntBASIC19.51■□□□□ 0.71
RNF34Q969K3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF34Q969K3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF34Q969K3 KRT8P45-201ENST00000414328 1447 ntBASIC19.51■□□□□ 0.71
RNF34Q969K3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF34Q969K3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF34Q969K3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF34Q969K3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF34Q969K3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms