Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HPS1Q92902 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.05■□□□□ 0.32
HPS1Q92902 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.05■□□□□ 0.32
HPS1Q92902 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.05■□□□□ 0.32
HPS1Q92902 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.05■□□□□ 0.32
HPS1Q92902 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.05■□□□□ 0.32
HPS1Q92902 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS1Q92902 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS1Q92902 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.05■□□□□ 0.32
HPS1Q92902 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS1Q92902 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS1Q92902 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HPS1Q92902 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.05■□□□□ 0.32
HPS1Q92902 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HPS1Q92902 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.05■□□□□ 0.32
HPS1Q92902 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS1Q92902 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HPS1Q92902 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HPS1Q92902 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.05■□□□□ 0.32
HPS1Q92902 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HPS1Q92902 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS1Q92902 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HPS1Q92902 AC006333.2-201ENST00000607957 2099 ntBASIC17.05■□□□□ 0.32
HPS1Q92902 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.04■□□□□ 0.32
HPS1Q92902 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.04■□□□□ 0.32
HPS1Q92902 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.04■□□□□ 0.32
HPS1Q92902 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.04■□□□□ 0.32
HPS1Q92902 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.04■□□□□ 0.32
HPS1Q92902 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.04■□□□□ 0.32
HPS1Q92902 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.04■□□□□ 0.32
HPS1Q92902 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.04■□□□□ 0.32
HPS1Q92902 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HPS1Q92902 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.04■□□□□ 0.32
HPS1Q92902 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
HPS1Q92902 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 MIR718-201ENST00000390190 70 ntBASIC17.04■□□□□ 0.32
HPS1Q92902 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.04■□□□□ 0.32
HPS1Q92902 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.04■□□□□ 0.32
HPS1Q92902 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.04■□□□□ 0.32
HPS1Q92902 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.04■□□□□ 0.32
HPS1Q92902 AL359736.2-201ENST00000621992 437 ntBASIC17.04■□□□□ 0.32
HPS1Q92902 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.04■□□□□ 0.32
HPS1Q92902 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.04■□□□□ 0.32
HPS1Q92902 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HPS1Q92902 FER1L4-210ENST00000615531 5998 ntBASIC17.04■□□□□ 0.32
HPS1Q92902 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.04■□□□□ 0.32
HPS1Q92902 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HPS1Q92902 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS1Q92902 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.03■□□□□ 0.32
HPS1Q92902 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.03■□□□□ 0.32
HPS1Q92902 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.03■□□□□ 0.32
HPS1Q92902 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.03■□□□□ 0.32
HPS1Q92902 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.03■□□□□ 0.32
HPS1Q92902 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.03■□□□□ 0.32
HPS1Q92902 FAM197Y4-202ENST00000622692 608 ntBASIC17.03■□□□□ 0.32
HPS1Q92902 AC012183.1-201ENST00000625197 499 ntBASIC17.03■□□□□ 0.32
HPS1Q92902 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.03■□□□□ 0.32
HPS1Q92902 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HPS1Q92902 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.03■□□□□ 0.32
HPS1Q92902 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS1Q92902 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPS1Q92902 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPS1Q92902 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HPS1Q92902 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPS1Q92902 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.02■□□□□ 0.32
HPS1Q92902 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms