Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PVRIG2P-201ENST00000435460 978 ntBASIC18.86■□□□□ 0.61
CHD5Q8TDI0 AC024243.1-201ENST00000609234 778 ntBASIC18.86■□□□□ 0.61
CHD5Q8TDI0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 ZNF444P1-201ENST00000559497 298 ntBASIC18.86■□□□□ 0.61
CHD5Q8TDI0 MIR3180-4-201ENST00000582223 153 ntBASIC18.86■□□□□ 0.61
CHD5Q8TDI0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.86■□□□□ 0.61
CHD5Q8TDI0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 AL024508.2-201ENST00000607749 1894 ntBASIC18.85■□□□□ 0.61
CHD5Q8TDI0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHD5Q8TDI0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 AC126763.1-201ENST00000552015 2118 ntBASIC18.84■□□□□ 0.61
CHD5Q8TDI0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHD5Q8TDI0 MYLKP1-201ENST00000509077 1580 ntBASIC18.83■□□□□ 0.61
CHD5Q8TDI0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.83■□□□□ 0.61
CHD5Q8TDI0 AC073592.3-201ENST00000625118 1834 ntBASIC18.83■□□□□ 0.61
CHD5Q8TDI0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.83■□□□□ 0.61
CHD5Q8TDI0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHD5Q8TDI0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHD5Q8TDI0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.83■□□□□ 0.61
CHD5Q8TDI0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHD5Q8TDI0 HOMER2P1-201ENST00000455653 964 ntBASIC18.83■□□□□ 0.61
CHD5Q8TDI0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.83■□□□□ 0.61
CHD5Q8TDI0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.83■□□□□ 0.61
CHD5Q8TDI0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.83■□□□□ 0.61
CHD5Q8TDI0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHD5Q8TDI0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHD5Q8TDI0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD5Q8TDI0 WIZP1-201ENST00000531444 2299 ntBASIC18.83■□□□□ 0.6
CHD5Q8TDI0 KRT89P-201ENST00000620027 1478 ntBASIC18.83■□□□□ 0.6
CHD5Q8TDI0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHD5Q8TDI0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD5Q8TDI0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CHD5Q8TDI0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHD5Q8TDI0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD5Q8TDI0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.82■□□□□ 0.6
CHD5Q8TDI0 AC092597.1-201ENST00000487352 616 ntBASIC18.82■□□□□ 0.6
CHD5Q8TDI0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.82■□□□□ 0.6
CHD5Q8TDI0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CHD5Q8TDI0 AL031432.5-201ENST00000641059 760 ntBASIC18.82■□□□□ 0.6
CHD5Q8TDI0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHD5Q8TDI0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHD5Q8TDI0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.82■□□□□ 0.6
CHD5Q8TDI0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms