Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPS4Y2Q8TD47 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 AC134043.2-201ENST00000624206 2238 ntBASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.35■□□□□ 0.21
RPS4Y2Q8TD47 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 LTB4R2-202ENST00000528054 3092 ntBASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.34■□□□□ 0.21
RPS4Y2Q8TD47 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms