Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 AC068587.9-201ENST00000641814 219 ntBASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB42Q8N4Z0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 AP000523.1-201ENST00000398242 1049 ntBASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB42Q8N4Z0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 AC006333.2-201ENST00000607957 2099 ntBASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 SLC25A3P1-201ENST00000443844 931 ntBASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 FAM87A-204ENST00000613235 858 ntBASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 MYC-208ENST00000641036 567 ntBASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB42Q8N4Z0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 AL137013.1-201ENST00000432946 1228 ntBASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 AC012306.2-201ENST00000609350 630 ntBASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms