Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NME8Q8N427 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NME8Q8N427 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NME8Q8N427 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.55■□□□□ 0.88
NME8Q8N427 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.55■□□□□ 0.88
NME8Q8N427 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.55■□□□□ 0.88
NME8Q8N427 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NME8Q8N427 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.55■□□□□ 0.88
NME8Q8N427 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.55■□□□□ 0.88
NME8Q8N427 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.55■□□□□ 0.88
NME8Q8N427 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.55■□□□□ 0.88
NME8Q8N427 AC010240.3-201ENST00000607688 395 ntBASIC20.55■□□□□ 0.88
NME8Q8N427 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.55■□□□□ 0.88
NME8Q8N427 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NME8Q8N427 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NME8Q8N427 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NME8Q8N427 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.55■□□□□ 0.88
NME8Q8N427 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NME8Q8N427 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
NME8Q8N427 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.54■□□□□ 0.88
NME8Q8N427 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NME8Q8N427 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.54■□□□□ 0.88
NME8Q8N427 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.54■□□□□ 0.88
NME8Q8N427 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NME8Q8N427 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NME8Q8N427 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NME8Q8N427 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.54■□□□□ 0.88
NME8Q8N427 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NME8Q8N427 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.54■□□□□ 0.88
NME8Q8N427 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NME8Q8N427 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NME8Q8N427 DUSP5P1-201ENST00000441325 1139 ntBASIC20.54■□□□□ 0.88
NME8Q8N427 TSSC2-201ENST00000450217 709 ntBASIC20.54■□□□□ 0.88
NME8Q8N427 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
NME8Q8N427 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NME8Q8N427 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NME8Q8N427 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.54■□□□□ 0.88
NME8Q8N427 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NME8Q8N427 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.54■□□□□ 0.88
NME8Q8N427 AC093525.10-201ENST00000625130 1569 ntBASIC20.54■□□□□ 0.88
NME8Q8N427 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NME8Q8N427 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.54■□□□□ 0.88
NME8Q8N427 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NME8Q8N427 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
NME8Q8N427 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.54■□□□□ 0.88
NME8Q8N427 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.53■□□□□ 0.88
NME8Q8N427 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.53■□□□□ 0.88
NME8Q8N427 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
NME8Q8N427 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.53■□□□□ 0.88
NME8Q8N427 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NME8Q8N427 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NME8Q8N427 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 KRT8P26-201ENST00000534154 1276 ntBASIC20.53■□□□□ 0.88
NME8Q8N427 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.53■□□□□ 0.88
NME8Q8N427 CLEC4GP1-201ENST00000596555 870 ntBASIC20.53■□□□□ 0.88
NME8Q8N427 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.53■□□□□ 0.88
NME8Q8N427 AC016734.2-201ENST00000624325 1377 ntBASIC20.53■□□□□ 0.88
NME8Q8N427 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.53■□□□□ 0.88
NME8Q8N427 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.53■□□□□ 0.88
NME8Q8N427 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NME8Q8N427 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.53■□□□□ 0.88
NME8Q8N427 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NME8Q8N427 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.53■□□□□ 0.88
NME8Q8N427 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NME8Q8N427 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NME8Q8N427 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NME8Q8N427 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
NME8Q8N427 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NME8Q8N427 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NME8Q8N427 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.52■□□□□ 0.88
NME8Q8N427 AL450487.1-201ENST00000426799 995 ntBASIC20.52■□□□□ 0.88
NME8Q8N427 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.52■□□□□ 0.88
NME8Q8N427 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.52■□□□□ 0.88
NME8Q8N427 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NME8Q8N427 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.52■□□□□ 0.88
NME8Q8N427 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.52■□□□□ 0.88
NME8Q8N427 AC068587.9-201ENST00000641814 219 ntBASIC20.52■□□□□ 0.88
NME8Q8N427 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
NME8Q8N427 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NME8Q8N427 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
NME8Q8N427 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NME8Q8N427 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
NME8Q8N427 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
NME8Q8N427 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
NME8Q8N427 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
NME8Q8N427 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms