Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC25.85■■□□□ 1.73
ARHGEF28Q8N1W1 SLC25A6P4-201ENST00000586535 553 ntBASIC25.85■■□□□ 1.73
ARHGEF28Q8N1W1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ARHGEF28Q8N1W1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC25.85■■□□□ 1.73
ARHGEF28Q8N1W1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
ARHGEF28Q8N1W1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ARHGEF28Q8N1W1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ARHGEF28Q8N1W1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
ARHGEF28Q8N1W1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
ARHGEF28Q8N1W1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
ARHGEF28Q8N1W1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC25.85■■□□□ 1.73
ARHGEF28Q8N1W1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC25.85■■□□□ 1.73
ARHGEF28Q8N1W1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ARHGEF28Q8N1W1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ARHGEF28Q8N1W1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ARHGEF28Q8N1W1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 NUS1P1-201ENST00000446295 882 ntBASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 AC090616.6-201ENST00000582640 721 ntBASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 AC005332.3-201ENST00000589904 676 ntBASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 AC099336.1-202ENST00000602961 463 ntBASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 AC073130.3-201ENST00000624389 2278 ntBASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ARHGEF28Q8N1W1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 AC007952.6-201ENST00000573168 2673 ntBASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 AC003957.1-201ENST00000625108 2673 ntBASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 AC004263.2-201ENST00000617183 678 ntBASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC25.83■■□□□ 1.73
ARHGEF28Q8N1W1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
ARHGEF28Q8N1W1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC25.83■■□□□ 1.72
ARHGEF28Q8N1W1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC25.83■■□□□ 1.72
ARHGEF28Q8N1W1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
ARHGEF28Q8N1W1 IGHV3-47-201ENST00000425060 335 ntBASIC25.83■■□□□ 1.72
ARHGEF28Q8N1W1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC25.83■■□□□ 1.72
ARHGEF28Q8N1W1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC25.83■■□□□ 1.72
ARHGEF28Q8N1W1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
ARHGEF28Q8N1W1 NSUN5P1-202ENST00000421140 1535 ntBASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 NSUN5P2-203ENST00000457352 1529 ntBASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 KRT18P31-201ENST00000506277 1292 ntBASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 AC113404.2-201ENST00000507884 177 ntBASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 FOSL1P1-201ENST00000511041 816 ntBASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ARHGEF28Q8N1W1 AL024508.2-201ENST00000607749 1894 ntBASIC25.81■■□□□ 1.72
ARHGEF28Q8N1W1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC25.81■■□□□ 1.72
ARHGEF28Q8N1W1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ARHGEF28Q8N1W1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ARHGEF28Q8N1W1 MIR149-201ENST00000384879 89 ntBASIC25.81■■□□□ 1.72
ARHGEF28Q8N1W1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ARHGEF28Q8N1W1 FAAHP1-202ENST00000446499 1238 ntBASIC25.81■■□□□ 1.72
ARHGEF28Q8N1W1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ARHGEF28Q8N1W1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC25.81■■□□□ 1.72
ARHGEF28Q8N1W1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC25.81■■□□□ 1.72
ARHGEF28Q8N1W1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC25.81■■□□□ 1.72
ARHGEF28Q8N1W1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
ARHGEF28Q8N1W1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms