Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST3Q8N1M1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST3Q8N1M1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST3Q8N1M1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.33■□□□□ 0.37
BEST3Q8N1M1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 UPK3BP1-201ENST00000428678 509 ntBASIC17.33■□□□□ 0.36
BEST3Q8N1M1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 AC112907.2-201ENST00000448639 330 ntBASIC17.33■□□□□ 0.36
BEST3Q8N1M1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
BEST3Q8N1M1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 AC116562.4-201ENST00000641316 2276 ntBASIC17.32■□□□□ 0.36
BEST3Q8N1M1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 STARP1-201ENST00000397973 869 ntBASIC17.32■□□□□ 0.36
BEST3Q8N1M1 SPDYE15P-201ENST00000424157 909 ntBASIC17.32■□□□□ 0.36
BEST3Q8N1M1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 FAM86EP-206ENST00000510506 987 ntBASIC17.32■□□□□ 0.36
BEST3Q8N1M1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 MIR3180-5-201ENST00000583743 153 ntBASIC17.32■□□□□ 0.36
BEST3Q8N1M1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.32■□□□□ 0.36
BEST3Q8N1M1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 PCED1CP-201ENST00000419887 785 ntBASIC17.31■□□□□ 0.36
BEST3Q8N1M1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 AP000550.4-202ENST00000639755 178 ntBASIC17.31■□□□□ 0.36
BEST3Q8N1M1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 AC090340.1-201ENST00000620778 4980 ntBASIC17.31■□□□□ 0.36
BEST3Q8N1M1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST3Q8N1M1 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.31■□□□□ 0.36
BEST3Q8N1M1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms