Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NPAS3Q8IXF0 AC034236.2-201ENST00000606662 1610 ntBASIC19.33■□□□□ 0.68
NPAS3Q8IXF0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 PCDHAC2-203ENST00000615316 3011 ntBASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS3Q8IXF0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 AC006333.2-201ENST00000607957 2099 ntBASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 AL160237.2-201ENST00000556165 472 ntBASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 MIR3180-4-201ENST00000582223 153 ntBASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 LINC01711-201ENST00000598340 967 ntBASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 IGHV3-41-201ENST00000613121 348 ntBASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.31■□□□□ 0.68
NPAS3Q8IXF0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 AC125437.2-201ENST00000625180 2167 ntBASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 IRX1P1-201ENST00000438849 1838 ntBASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 AC074051.2-201ENST00000565115 352 ntBASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 GPR32P1-201ENST00000601788 811 ntBASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 AC138894.3-201ENST00000603787 634 ntBASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 AC233702.3-201ENST00000578656 1387 ntBASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS3Q8IXF0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS3Q8IXF0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.29■□□□□ 0.68
NPAS3Q8IXF0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NPAS3Q8IXF0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.29■□□□□ 0.68
NPAS3Q8IXF0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.29■□□□□ 0.68
NPAS3Q8IXF0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.29■□□□□ 0.68
NPAS3Q8IXF0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS3Q8IXF0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
NPAS3Q8IXF0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS3Q8IXF0 LINC00167-201ENST00000530583 1419 ntBASIC19.29■□□□□ 0.68
NPAS3Q8IXF0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS3Q8IXF0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms