Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 RN7SL606P-201ENST00000472779 293 ntBASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 VENTXP7-201ENST00000475503 772 ntBASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 AL353801.3-201ENST00000609898 542 ntBASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 AC124864.1-201ENST00000623408 392 ntBASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 CLDN5-201ENST00000403084 2357 ntBASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPAS4Q8IUM7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS4Q8IUM7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPAS4Q8IUM7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS4Q8IUM7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPAS4Q8IUM7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPAS4Q8IUM7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS4Q8IUM7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 AC106795.1-205ENST00000512851 1056 ntBASIC20■□□□□ 0.79
NPAS4Q8IUM7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 AP002469.2-201ENST00000531724 424 ntBASIC20■□□□□ 0.79
NPAS4Q8IUM7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS4Q8IUM7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPAS4Q8IUM7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20■□□□□ 0.79
NPAS4Q8IUM7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS4Q8IUM7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPAS4Q8IUM7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPAS4Q8IUM7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20■□□□□ 0.79
NPAS4Q8IUM7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 AL121912.1-201ENST00000603683 238 ntBASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
NPAS4Q8IUM7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 AL353692.3-201ENST00000407031 1396 ntBASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 PCDHAC2-203ENST00000615316 3011 ntBASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 KRT16P4-201ENST00000453883 522 ntBASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 AL662844.1-201ENST00000546340 181 ntBASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms