Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 YBX2P1-201ENST00000394192 760 ntBASIC23.42■■□□□ 1.34
COL23A1Q86Y22 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 DHDH-204ENST00000523250 634 ntTSL 5 BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 AP001269.4-201ENST00000609611 512 ntBASIC23.42■■□□□ 1.34
COL23A1Q86Y22 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL23A1Q86Y22 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL23A1Q86Y22 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL23A1Q86Y22 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL23A1Q86Y22 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.41■■□□□ 1.34
COL23A1Q86Y22 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL23A1Q86Y22 RPS2P28-201ENST00000314255 741 ntBASIC23.41■■□□□ 1.34
COL23A1Q86Y22 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL23A1Q86Y22 RBM17P3-201ENST00000417687 1192 ntBASIC23.41■■□□□ 1.34
COL23A1Q86Y22 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC23.41■■□□□ 1.34
COL23A1Q86Y22 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL23A1Q86Y22 KRT8P32-201ENST00000512863 1461 ntBASIC23.41■■□□□ 1.34
COL23A1Q86Y22 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL23A1Q86Y22 LINC00565-201ENST00000562710 2331 ntBASIC23.41■■□□□ 1.34
COL23A1Q86Y22 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL23A1Q86Y22 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL23A1Q86Y22 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL23A1Q86Y22 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.4■■□□□ 1.34
COL23A1Q86Y22 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL23A1Q86Y22 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL23A1Q86Y22 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC23.4■■□□□ 1.34
COL23A1Q86Y22 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC23.4■■□□□ 1.34
COL23A1Q86Y22 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC23.4■■□□□ 1.34
COL23A1Q86Y22 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL23A1Q86Y22 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL23A1Q86Y22 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL23A1Q86Y22 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL23A1Q86Y22 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
COL23A1Q86Y22 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.39■■□□□ 1.34
COL23A1Q86Y22 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
COL23A1Q86Y22 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
COL23A1Q86Y22 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.39■■□□□ 1.34
COL23A1Q86Y22 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
COL23A1Q86Y22 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 DDT-203ENST00000403754 569 ntTSL 3 BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 AC021087.4-201ENST00000563761 564 ntBASIC23.39■■□□□ 1.33
COL23A1Q86Y22 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
COL23A1Q86Y22 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 TP73-AS1-210ENST00000637775 1455 ntBASIC23.38■■□□□ 1.33
COL23A1Q86Y22 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 AC005336.2-201ENST00000593183 939 ntBASIC23.38■■□□□ 1.33
COL23A1Q86Y22 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL23A1Q86Y22 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
COL23A1Q86Y22 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL23A1Q86Y22 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
COL23A1Q86Y22 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
COL23A1Q86Y22 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
COL23A1Q86Y22 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL23A1Q86Y22 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL23A1Q86Y22 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL23A1Q86Y22 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL23A1Q86Y22 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC23.37■■□□□ 1.33
COL23A1Q86Y22 KRT18P3-201ENST00000451602 1288 ntBASIC23.37■■□□□ 1.33
COL23A1Q86Y22 AC004967.1-201ENST00000453589 447 ntBASIC23.37■■□□□ 1.33
COL23A1Q86Y22 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL23A1Q86Y22 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC23.37■■□□□ 1.33
COL23A1Q86Y22 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms