Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 CRYGFP-201ENST00000418459 633 ntBASIC12.35□□□□□ -0.43
SCXQ7RTU7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 AC097488.1-201ENST00000507834 756 ntBASIC12.35□□□□□ -0.43
SCXQ7RTU7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 AP005242.2-201ENST00000580065 1175 ntBASIC12.35□□□□□ -0.43
SCXQ7RTU7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 AL590326.2-201ENST00000625139 305 ntBASIC12.35□□□□□ -0.43
SCXQ7RTU7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 AL162377.1-201ENST00000618844 1793 ntBASIC12.35□□□□□ -0.43
SCXQ7RTU7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCXQ7RTU7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC12.35□□□□□ -0.43
SCXQ7RTU7 BX119927.1-201ENST00000636596 1552 ntBASIC12.35□□□□□ -0.43
SCXQ7RTU7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC12.34□□□□□ -0.43
SCXQ7RTU7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SCXQ7RTU7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.34□□□□□ -0.43
SCXQ7RTU7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
SCXQ7RTU7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
SCXQ7RTU7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 ARMC10P1-201ENST00000313754 855 ntBASIC12.34□□□□□ -0.43
SCXQ7RTU7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.34□□□□□ -0.43
SCXQ7RTU7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SCXQ7RTU7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.34□□□□□ -0.43
SCXQ7RTU7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SCXQ7RTU7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.34□□□□□ -0.43
SCXQ7RTU7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SCXQ7RTU7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.34□□□□□ -0.43
SCXQ7RTU7 SLC25A1P4-201ENST00000567977 778 ntBASIC12.34□□□□□ -0.43
SCXQ7RTU7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 AC011298.2-201ENST00000617989 482 ntBASIC12.34□□□□□ -0.43
SCXQ7RTU7 HLA-A-209ENST00000638375 975 ntBASIC12.34□□□□□ -0.43
SCXQ7RTU7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms