Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC10.09□□□□□ -0.79
LCA10Q71F78 AL355001.2-201ENST00000620617 1191 ntBASIC10.09□□□□□ -0.79
LCA10Q71F78 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
LCA10Q71F78 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
LCA10Q71F78 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC10.09□□□□□ -0.79
LCA10Q71F78 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 ESPNP-201ENST00000270691 2015 ntBASIC10.09□□□□□ -0.79
LCA10Q71F78 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
LCA10Q71F78 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC10.09□□□□□ -0.79
LCA10Q71F78 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC10.09□□□□□ -0.79
LCA10Q71F78 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC10.09□□□□□ -0.79
LCA10Q71F78 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC10.08□□□□□ -0.8
LCA10Q71F78 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC10.08□□□□□ -0.8
LCA10Q71F78 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
LCA10Q71F78 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC10.08□□□□□ -0.8
LCA10Q71F78 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC10.08□□□□□ -0.8
LCA10Q71F78 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC10.08□□□□□ -0.8
LCA10Q71F78 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC10.08□□□□□ -0.8
LCA10Q71F78 MIR939-201ENST00000401314 82 ntBASIC10.08□□□□□ -0.8
LCA10Q71F78 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC10.08□□□□□ -0.8
LCA10Q71F78 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 AC245052.3-201ENST00000450182 901 ntBASIC10.08□□□□□ -0.8
LCA10Q71F78 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 AC091305.1-201ENST00000479476 895 ntBASIC10.08□□□□□ -0.8
LCA10Q71F78 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 AC079140.4-201ENST00000507448 529 ntBASIC10.08□□□□□ -0.8
LCA10Q71F78 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC10.08□□□□□ -0.8
LCA10Q71F78 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC10.08□□□□□ -0.8
LCA10Q71F78 TPRG1LP1-201ENST00000598702 760 ntBASIC10.08□□□□□ -0.8
LCA10Q71F78 AL354811.1-201ENST00000610286 706 ntBASIC10.08□□□□□ -0.8
LCA10Q71F78 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC10.08□□□□□ -0.8
LCA10Q71F78 CPT2-209ENST00000636935 803 ntTSL 5 BASIC10.08□□□□□ -0.8
LCA10Q71F78 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC10.08□□□□□ -0.8
LCA10Q71F78 KRT87P-202ENST00000534226 1464 ntBASIC10.08□□□□□ -0.8
LCA10Q71F78 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC10.08□□□□□ -0.8
LCA10Q71F78 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 GATB-213ENST00000515812 1893 ntTSL 5 BASIC10.08□□□□□ -0.8
LCA10Q71F78 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC10.08□□□□□ -0.8
LCA10Q71F78 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
LCA10Q71F78 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
LCA10Q71F78 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC10.08□□□□□ -0.8
LCA10Q71F78 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LCA10Q71F78 PCDHB17P-201ENST00000539533 2393 ntBASIC10.08□□□□□ -0.8
LCA10Q71F78 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
LCA10Q71F78 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC10.07□□□□□ -0.8
LCA10Q71F78 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
LCA10Q71F78 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC10.07□□□□□ -0.8
LCA10Q71F78 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC10.07□□□□□ -0.8
LCA10Q71F78 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC10.07□□□□□ -0.8
LCA10Q71F78 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms