Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 AL355075.4-201ENST00000554988 638 ntBASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 AL023875.1-201ENST00000640777 796 ntBASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNI2Q6ZMN8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 PRORSD1P-202ENST00000563365 2154 ntBASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 AC126763.1-201ENST00000552015 2118 ntBASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCNI2Q6ZMN8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 C2orf69P4-201ENST00000565394 541 ntBASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 RN7SL850P-201ENST00000579959 291 ntBASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 AC012313.1-201ENST00000593393 3059 ntBASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCNI2Q6ZMN8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 AC110285.5-201ENST00000611501 352 ntBASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNI2Q6ZMN8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms