Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CASC4Q6P4E1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.08■□□□□ 0.64
CASC4Q6P4E1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.08■□□□□ 0.64
CASC4Q6P4E1 MIR4651-201ENST00000582622 73 ntBASIC19.08■□□□□ 0.64
CASC4Q6P4E1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.08■□□□□ 0.64
CASC4Q6P4E1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.08■□□□□ 0.64
CASC4Q6P4E1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.08■□□□□ 0.64
CASC4Q6P4E1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CASC4Q6P4E1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CASC4Q6P4E1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.08■□□□□ 0.64
CASC4Q6P4E1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CASC4Q6P4E1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.08■□□□□ 0.64
CASC4Q6P4E1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.08■□□□□ 0.64
CASC4Q6P4E1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CASC4Q6P4E1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.07■□□□□ 0.64
CASC4Q6P4E1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 POU5F1P3-201ENST00000428824 1078 ntBASIC19.07■□□□□ 0.64
CASC4Q6P4E1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 RPS2P4-201ENST00000476944 856 ntBASIC19.07■□□□□ 0.64
CASC4Q6P4E1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CASC4Q6P4E1 AC135050.7-201ENST00000624508 2218 ntBASIC19.06■□□□□ 0.64
CASC4Q6P4E1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 HEIH-201ENST00000623091 1652 ntBASIC19.06■□□□□ 0.64
CASC4Q6P4E1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 KSR1P1-201ENST00000446298 240 ntBASIC19.06■□□□□ 0.64
CASC4Q6P4E1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 AL390961.4-201ENST00000623958 2535 ntBASIC19.06■□□□□ 0.64
CASC4Q6P4E1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 AC126763.1-201ENST00000552015 2118 ntBASIC19.06■□□□□ 0.64
CASC4Q6P4E1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.06■□□□□ 0.64
CASC4Q6P4E1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 AL353807.1-201ENST00000427475 662 ntBASIC19.05■□□□□ 0.64
CASC4Q6P4E1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 PRSS44-201ENST00000515154 1146 ntBASIC19.05■□□□□ 0.64
CASC4Q6P4E1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 CR392000.1-201ENST00000624770 1228 ntBASIC19.05■□□□□ 0.64
CASC4Q6P4E1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
CASC4Q6P4E1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms