Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 MIR564-202ENST00000385049 94 ntBASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 AL032819.2-201ENST00000624543 2162 ntBASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.27■□□□□ 0.35
H3F3CQ6NXT2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
H3F3CQ6NXT2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
H3F3CQ6NXT2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
H3F3CQ6NXT2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
H3F3CQ6NXT2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
H3F3CQ6NXT2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
H3F3CQ6NXT2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 AC093484.2-201ENST00000580996 2166 ntBASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 SPDYE13P-201ENST00000445314 798 ntBASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
H3F3CQ6NXT2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 VENTXP5-201ENST00000523979 775 ntBASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 AC068587.9-201ENST00000641814 219 ntBASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
H3F3CQ6NXT2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 AC104390.1-201ENST00000555663 520 ntBASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 MIR3917-201ENST00000580971 93 ntBASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H3F3CQ6NXT2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms