Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 FEM1AP3-201ENST00000403722 1741 ntBASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 AL671883.3-201ENST00000603274 991 ntBASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 AL773604.1-201ENST00000617417 272 ntBASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 TP73-AS1-207ENST00000624167 988 ntBASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 AF228730.7-201ENST00000641842 219 ntBASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 KRT89P-201ENST00000620027 1478 ntBASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD4Q5XG99 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 AC112907.3-201ENST00000577781 2400 ntBASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 POM121L3P-201ENST00000419331 1163 ntBASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD4Q5XG99 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 IL9RP2-201ENST00000423948 1312 ntBASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 KRT18P13-201ENST00000400056 1290 ntBASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 FAM197Y8-203ENST00000450145 560 ntBASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 AC091607.1-201ENST00000490318 1060 ntBASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD4Q5XG99 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms