Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
USH1GQ495M9 AL136038.3-201ENST00000561909 1096 ntBASIC21.44■■□□□ 1.02
USH1GQ495M9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.44■■□□□ 1.02
USH1GQ495M9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.44■■□□□ 1.02
USH1GQ495M9 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.44■■□□□ 1.02
USH1GQ495M9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.44■■□□□ 1.02
USH1GQ495M9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USH1GQ495M9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USH1GQ495M9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
USH1GQ495M9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.44■■□□□ 1.02
USH1GQ495M9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
USH1GQ495M9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
USH1GQ495M9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
USH1GQ495M9 AC034236.2-201ENST00000606662 1610 ntBASIC21.44■■□□□ 1.02
USH1GQ495M9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.44■■□□□ 1.02
USH1GQ495M9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
USH1GQ495M9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
USH1GQ495M9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USH1GQ495M9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USH1GQ495M9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USH1GQ495M9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USH1GQ495M9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.43■■□□□ 1.02
USH1GQ495M9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
USH1GQ495M9 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.43■■□□□ 1.02
USH1GQ495M9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
USH1GQ495M9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.43■■□□□ 1.02
USH1GQ495M9 MIR3917-201ENST00000580971 93 ntBASIC21.43■■□□□ 1.02
USH1GQ495M9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.43■■□□□ 1.02
USH1GQ495M9 AC079602.3-201ENST00000623931 403 ntBASIC21.43■■□□□ 1.02
USH1GQ495M9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.43■■□□□ 1.02
USH1GQ495M9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
USH1GQ495M9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USH1GQ495M9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USH1GQ495M9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
USH1GQ495M9 AL357033.4-201ENST00000617703 1807 ntBASIC21.43■■□□□ 1.02
USH1GQ495M9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.43■■□□□ 1.02
USH1GQ495M9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
USH1GQ495M9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USH1GQ495M9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USH1GQ495M9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
USH1GQ495M9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
USH1GQ495M9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
USH1GQ495M9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
USH1GQ495M9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
USH1GQ495M9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
USH1GQ495M9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
USH1GQ495M9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
USH1GQ495M9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
USH1GQ495M9 MTMR9LP-203ENST00000426597 1545 ntBASIC21.42■■□□□ 1.02
USH1GQ495M9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
USH1GQ495M9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.42■■□□□ 1.02
USH1GQ495M9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
USH1GQ495M9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.42■■□□□ 1.02
USH1GQ495M9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
USH1GQ495M9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.42■■□□□ 1.02
USH1GQ495M9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.42■■□□□ 1.02
USH1GQ495M9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
USH1GQ495M9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
USH1GQ495M9 HOXB1-202ENST00000577092 1414 ntBASIC21.42■■□□□ 1.02
USH1GQ495M9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
USH1GQ495M9 AC010240.3-201ENST00000607688 395 ntBASIC21.42■■□□□ 1.02
USH1GQ495M9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
USH1GQ495M9 AC093458.2-201ENST00000623150 629 ntBASIC21.42■■□□□ 1.02
USH1GQ495M9 AC116407.4-201ENST00000623319 1061 ntBASIC21.42■■□□□ 1.02
USH1GQ495M9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
USH1GQ495M9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
USH1GQ495M9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
USH1GQ495M9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
USH1GQ495M9 Z98044.1-201ENST00000632503 1764 ntBASIC21.41■■□□□ 1.02
USH1GQ495M9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.41■■□□□ 1.02
USH1GQ495M9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.41■■□□□ 1.02
USH1GQ495M9 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.41■■□□□ 1.02
USH1GQ495M9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.41■■□□□ 1.02
USH1GQ495M9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.41■■□□□ 1.02
USH1GQ495M9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
USH1GQ495M9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
USH1GQ495M9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.41■■□□□ 1.02
USH1GQ495M9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
USH1GQ495M9 AC104390.1-201ENST00000555663 520 ntBASIC21.41■■□□□ 1.02
USH1GQ495M9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.41■■□□□ 1.02
USH1GQ495M9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
USH1GQ495M9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.41■■□□□ 1.02
USH1GQ495M9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
USH1GQ495M9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.41■■□□□ 1.02
USH1GQ495M9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
USH1GQ495M9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.41■■□□□ 1.02
USH1GQ495M9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
USH1GQ495M9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
USH1GQ495M9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.41■■□□□ 1.02
USH1GQ495M9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.4■■□□□ 1.02
USH1GQ495M9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
USH1GQ495M9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
USH1GQ495M9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
USH1GQ495M9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
USH1GQ495M9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
USH1GQ495M9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.4■■□□□ 1.02
USH1GQ495M9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
USH1GQ495M9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
USH1GQ495M9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.4■■□□□ 1.02
USH1GQ495M9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms