Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCHD3Q3KNS1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTCHD3Q3KNS1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.26■□□□□ 0.51
PTCHD3Q3KNS1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.26■□□□□ 0.51
PTCHD3Q3KNS1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD3Q3KNS1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
PTCHD3Q3KNS1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCHD3Q3KNS1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD3Q3KNS1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
PTCHD3Q3KNS1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCHD3Q3KNS1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 MTMR9LP-203ENST00000426597 1545 ntBASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 AC010203.1-204ENST00000548782 407 ntBASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCHD3Q3KNS1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 AC008622.2-201ENST00000617006 1229 ntBASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCHD3Q3KNS1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 RCC2P3-201ENST00000418112 1537 ntBASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 AL049597.2-201ENST00000565575 961 ntBASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 AC104581.1-202ENST00000635932 2618 ntBASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCHD3Q3KNS1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms