Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NKX6-1P78426 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NKX6-1P78426 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-1P78426 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.46■□□□□ 0.23
NKX6-1P78426 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-1P78426 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.46■□□□□ 0.23
NKX6-1P78426 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NKX6-1P78426 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NKX6-1P78426 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
NKX6-1P78426 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.45■□□□□ 0.22
NKX6-1P78426 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.45■□□□□ 0.22
NKX6-1P78426 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NKX6-1P78426 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.45■□□□□ 0.22
NKX6-1P78426 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
NKX6-1P78426 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NKX6-1P78426 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.45■□□□□ 0.22
NKX6-1P78426 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
NKX6-1P78426 TSPY23P-201ENST00000440136 739 ntBASIC16.45■□□□□ 0.22
NKX6-1P78426 HCG4P8-203ENST00000443049 980 ntBASIC16.45■□□□□ 0.22
NKX6-1P78426 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 TSPY17P-201ENST00000450329 467 ntBASIC16.45■□□□□ 0.22
NKX6-1P78426 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NKX6-1P78426 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.45■□□□□ 0.22
NKX6-1P78426 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
NKX6-1P78426 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.45■□□□□ 0.22
NKX6-1P78426 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
NKX6-1P78426 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.45■□□□□ 0.22
NKX6-1P78426 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.45■□□□□ 0.22
NKX6-1P78426 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX6-1P78426 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-1P78426 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-1P78426 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-1P78426 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.44■□□□□ 0.22
NKX6-1P78426 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.44■□□□□ 0.22
NKX6-1P78426 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-1P78426 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-1P78426 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.44■□□□□ 0.22
NKX6-1P78426 AC020763.4-201ENST00000623414 4170 ntBASIC16.44■□□□□ 0.22
NKX6-1P78426 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-1P78426 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.44■□□□□ 0.22
NKX6-1P78426 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.44■□□□□ 0.22
NKX6-1P78426 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NKX6-1P78426 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.44■□□□□ 0.22
NKX6-1P78426 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NKX6-1P78426 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-1P78426 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-1P78426 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.44■□□□□ 0.22
NKX6-1P78426 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.44■□□□□ 0.22
NKX6-1P78426 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-1P78426 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-1P78426 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.44■□□□□ 0.22
NKX6-1P78426 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.44■□□□□ 0.22
NKX6-1P78426 AL671277.2-201ENST00000458060 996 ntBASIC16.44■□□□□ 0.22
NKX6-1P78426 CA15P1-201ENST00000481698 905 ntBASIC16.44■□□□□ 0.22
NKX6-1P78426 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
NKX6-1P78426 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.44■□□□□ 0.22
NKX6-1P78426 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.44■□□□□ 0.22
NKX6-1P78426 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.44■□□□□ 0.22
NKX6-1P78426 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.44■□□□□ 0.22
NKX6-1P78426 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.44■□□□□ 0.22
NKX6-1P78426 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.44■□□□□ 0.22
NKX6-1P78426 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
NKX6-1P78426 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.44■□□□□ 0.22
NKX6-1P78426 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-1P78426 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-1P78426 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-1P78426 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-1P78426 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.44■□□□□ 0.22
NKX6-1P78426 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NKX6-1P78426 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
NKX6-1P78426 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NKX6-1P78426 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NKX6-1P78426 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.43■□□□□ 0.22
NKX6-1P78426 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
NKX6-1P78426 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
NKX6-1P78426 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms