Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC42P60953 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDC42P60953 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC42P60953 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDC42P60953 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDC42P60953 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42P60953 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42P60953 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42P60953 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42P60953 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42P60953 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42P60953 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42P60953 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.09■□□□□ 0.33
CDC42P60953 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42P60953 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42P60953 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.09■□□□□ 0.33
CDC42P60953 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CDC42P60953 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42P60953 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CDC42P60953 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.09■□□□□ 0.33
CDC42P60953 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDC42P60953 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CDC42P60953 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42P60953 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42P60953 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42P60953 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDC42P60953 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CDC42P60953 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC42P60953 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC42P60953 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CDC42P60953 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.08■□□□□ 0.33
CDC42P60953 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CDC42P60953 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.08■□□□□ 0.33
CDC42P60953 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CDC42P60953 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC42P60953 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC42P60953 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC42P60953 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.08■□□□□ 0.32
CDC42P60953 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDC42P60953 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.08■□□□□ 0.32
CDC42P60953 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42P60953 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.08■□□□□ 0.32
CDC42P60953 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.08■□□□□ 0.32
CDC42P60953 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42P60953 TSPY23P-201ENST00000440136 739 ntBASIC17.08■□□□□ 0.32
CDC42P60953 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.08■□□□□ 0.32
CDC42P60953 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.08■□□□□ 0.32
CDC42P60953 AF201337.1-201ENST00000520239 748 ntBASIC17.08■□□□□ 0.32
CDC42P60953 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.08■□□□□ 0.32
CDC42P60953 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CDC42P60953 AC105036.2-201ENST00000569468 176 ntBASIC17.08■□□□□ 0.32
CDC42P60953 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CDC42P60953 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.08■□□□□ 0.32
CDC42P60953 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.08■□□□□ 0.32
CDC42P60953 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42P60953 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42P60953 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42P60953 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42P60953 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42P60953 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42P60953 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42P60953 AC135776.1-201ENST00000319817 2481 ntBASIC17.08■□□□□ 0.32
CDC42P60953 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CDC42P60953 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42P60953 AC134043.2-201ENST00000624206 2238 ntBASIC17.08■□□□□ 0.32
CDC42P60953 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42P60953 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42P60953 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CDC42P60953 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.07■□□□□ 0.32
CDC42P60953 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDC42P60953 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDC42P60953 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.07■□□□□ 0.32
CDC42P60953 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CDC42P60953 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.07■□□□□ 0.32
CDC42P60953 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDC42P60953 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDC42P60953 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.07■□□□□ 0.32
CDC42P60953 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.07■□□□□ 0.32
CDC42P60953 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.07■□□□□ 0.32
CDC42P60953 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.07■□□□□ 0.32
CDC42P60953 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42P60953 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CDC42P60953 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms