Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB38P57729 AC112777.1-201ENST00000540175 1423 ntBASIC17.55■□□□□ 0.4
RAB38P57729 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB38P57729 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB38P57729 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RAB38P57729 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB38P57729 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB38P57729 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB38P57729 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.55■□□□□ 0.4
RAB38P57729 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.55■□□□□ 0.4
RAB38P57729 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RAB38P57729 COX11P1-201ENST00000489116 835 ntBASIC17.55■□□□□ 0.4
RAB38P57729 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.55■□□□□ 0.4
RAB38P57729 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB38P57729 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB38P57729 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.55■□□□□ 0.4
RAB38P57729 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB38P57729 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.55■□□□□ 0.4
RAB38P57729 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB38P57729 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RAB38P57729 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB38P57729 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RAB38P57729 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB38P57729 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
RAB38P57729 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB38P57729 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RAB38P57729 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB38P57729 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB38P57729 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB38P57729 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB38P57729 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB38P57729 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RAB38P57729 AC093503.3-201ENST00000624917 2352 ntBASIC17.54■□□□□ 0.4
RAB38P57729 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB38P57729 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RAB38P57729 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAB38P57729 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB38P57729 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAB38P57729 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB38P57729 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB38P57729 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB38P57729 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAB38P57729 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB38P57729 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB38P57729 AP000593.1-201ENST00000393668 712 ntBASIC17.54■□□□□ 0.4
RAB38P57729 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB38P57729 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB38P57729 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB38P57729 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB38P57729 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB38P57729 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB38P57729 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB38P57729 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB38P57729 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB38P57729 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB38P57729 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB38P57729 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB38P57729 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
RAB38P57729 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RAB38P57729 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.53■□□□□ 0.4
RAB38P57729 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RAB38P57729 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB38P57729 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.53■□□□□ 0.4
RAB38P57729 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB38P57729 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.53■□□□□ 0.4
RAB38P57729 RN7SL850P-201ENST00000579959 291 ntBASIC17.53■□□□□ 0.4
RAB38P57729 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.53■□□□□ 0.4
RAB38P57729 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
RAB38P57729 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB38P57729 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB38P57729 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB38P57729 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB38P57729 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB38P57729 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RAB38P57729 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB38P57729 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB38P57729 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB38P57729 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB38P57729 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB38P57729 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB38P57729 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB38P57729 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms