Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.87■□□□□ 0.61
WNT3AP56704 AC009113.1-201ENST00000570267 2443 ntBASIC18.87■□□□□ 0.61
WNT3AP56704 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.87■□□□□ 0.61
WNT3AP56704 MIR3180-5-201ENST00000583743 153 ntBASIC18.87■□□□□ 0.61
WNT3AP56704 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.87■□□□□ 0.61
WNT3AP56704 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
WNT3AP56704 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
WNT3AP56704 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
WNT3AP56704 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
WNT3AP56704 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.86■□□□□ 0.61
WNT3AP56704 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
WNT3AP56704 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
WNT3AP56704 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 AC036111.1-201ENST00000533973 1582 ntBASIC18.86■□□□□ 0.61
WNT3AP56704 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
WNT3AP56704 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.86■□□□□ 0.61
WNT3AP56704 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.86■□□□□ 0.61
WNT3AP56704 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.86■□□□□ 0.61
WNT3AP56704 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
WNT3AP56704 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.86■□□□□ 0.61
WNT3AP56704 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.86■□□□□ 0.61
WNT3AP56704 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
WNT3AP56704 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.86■□□□□ 0.61
WNT3AP56704 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.86■□□□□ 0.61
WNT3AP56704 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 RNF165-205ENST00000588679 2904 ntBASIC18.86■□□□□ 0.61
WNT3AP56704 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.86■□□□□ 0.61
WNT3AP56704 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.86■□□□□ 0.61
WNT3AP56704 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
WNT3AP56704 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
WNT3AP56704 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 KRT8P45-201ENST00000414328 1447 ntBASIC18.85■□□□□ 0.61
WNT3AP56704 AC112777.1-201ENST00000540175 1423 ntBASIC18.85■□□□□ 0.61
WNT3AP56704 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.85■□□□□ 0.61
WNT3AP56704 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
WNT3AP56704 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.85■□□□□ 0.61
WNT3AP56704 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
WNT3AP56704 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 AC010653.2-201ENST00000623505 997 ntBASIC18.85■□□□□ 0.61
WNT3AP56704 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
WNT3AP56704 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 AC090164.3-201ENST00000610780 2143 ntBASIC18.85■□□□□ 0.61
WNT3AP56704 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
WNT3AP56704 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
WNT3AP56704 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.84■□□□□ 0.61
WNT3AP56704 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
WNT3AP56704 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.84■□□□□ 0.61
WNT3AP56704 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
WNT3AP56704 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
WNT3AP56704 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.84■□□□□ 0.61
WNT3AP56704 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.84■□□□□ 0.61
WNT3AP56704 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.84■□□□□ 0.61
WNT3AP56704 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.84■□□□□ 0.61
WNT3AP56704 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
WNT3AP56704 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
WNT3AP56704 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
WNT3AP56704 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.84■□□□□ 0.61
WNT3AP56704 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.84■□□□□ 0.61
WNT3AP56704 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
WNT3AP56704 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
WNT3AP56704 CR769767.2-201ENST00000622735 460 ntBASIC18.84■□□□□ 0.61
WNT3AP56704 MYC-208ENST00000641036 567 ntBASIC18.84■□□□□ 0.61
WNT3AP56704 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
WNT3AP56704 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms