Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC4P55056 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.71□□□□□ -0.21
APOC4P55056 AC009065.1-201ENST00000564055 1225 ntBASIC13.71□□□□□ -0.21
APOC4P55056 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.71□□□□□ -0.21
APOC4P55056 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
APOC4P55056 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.71□□□□□ -0.21
APOC4P55056 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
APOC4P55056 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.71□□□□□ -0.21
APOC4P55056 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC4P55056 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
APOC4P55056 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.71□□□□□ -0.22
APOC4P55056 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOC4P55056 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
APOC4P55056 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOC4P55056 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOC4P55056 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
APOC4P55056 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC4P55056 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.7□□□□□ -0.22
APOC4P55056 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC4P55056 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.7□□□□□ -0.22
APOC4P55056 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOC4P55056 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC4P55056 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC4P55056 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC4P55056 KRT8P32-201ENST00000512863 1461 ntBASIC13.7□□□□□ -0.22
APOC4P55056 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC4P55056 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
APOC4P55056 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.7□□□□□ -0.22
APOC4P55056 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC4P55056 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC4P55056 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.7□□□□□ -0.22
APOC4P55056 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.7□□□□□ -0.22
APOC4P55056 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.7□□□□□ -0.22
APOC4P55056 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.7□□□□□ -0.22
APOC4P55056 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.7□□□□□ -0.22
APOC4P55056 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.7□□□□□ -0.22
APOC4P55056 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.7□□□□□ -0.22
APOC4P55056 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.7□□□□□ -0.22
APOC4P55056 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.7□□□□□ -0.22
APOC4P55056 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC4P55056 AC024243.1-201ENST00000609234 778 ntBASIC13.7□□□□□ -0.22
APOC4P55056 MYC-208ENST00000641036 567 ntBASIC13.7□□□□□ -0.22
APOC4P55056 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
APOC4P55056 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC4P55056 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.7□□□□□ -0.22
APOC4P55056 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
APOC4P55056 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.7□□□□□ -0.22
APOC4P55056 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOC4P55056 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
APOC4P55056 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
APOC4P55056 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC13.69□□□□□ -0.22
APOC4P55056 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.69□□□□□ -0.22
APOC4P55056 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.69□□□□□ -0.22
APOC4P55056 AL031133.1-201ENST00000406807 723 ntBASIC13.69□□□□□ -0.22
APOC4P55056 KRT18P23-201ENST00000435622 1283 ntBASIC13.69□□□□□ -0.22
APOC4P55056 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.69□□□□□ -0.22
APOC4P55056 AC112907.2-201ENST00000448639 330 ntBASIC13.69□□□□□ -0.22
APOC4P55056 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.69□□□□□ -0.22
APOC4P55056 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
APOC4P55056 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.69□□□□□ -0.22
APOC4P55056 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.69□□□□□ -0.22
APOC4P55056 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.69□□□□□ -0.22
APOC4P55056 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.69□□□□□ -0.22
APOC4P55056 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.69□□□□□ -0.22
APOC4P55056 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC13.69□□□□□ -0.22
APOC4P55056 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.69□□□□□ -0.22
APOC4P55056 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOC4P55056 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC4P55056 AC034236.2-201ENST00000606662 1610 ntBASIC13.68□□□□□ -0.22
APOC4P55056 AC093484.2-201ENST00000580996 2166 ntBASIC13.68□□□□□ -0.22
APOC4P55056 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC4P55056 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.68□□□□□ -0.22
APOC4P55056 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC4P55056 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.68□□□□□ -0.22
APOC4P55056 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC4P55056 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC4P55056 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms