Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.85■□□□□ 0.61
LIMK2P53671 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.85■□□□□ 0.61
LIMK2P53671 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.85■□□□□ 0.61
LIMK2P53671 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.85■□□□□ 0.61
LIMK2P53671 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.85■□□□□ 0.61
LIMK2P53671 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.85■□□□□ 0.61
LIMK2P53671 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 HEIH-201ENST00000623091 1652 ntBASIC18.85■□□□□ 0.61
LIMK2P53671 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.85■□□□□ 0.61
LIMK2P53671 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.85■□□□□ 0.61
LIMK2P53671 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.85■□□□□ 0.61
LIMK2P53671 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.84■□□□□ 0.61
LIMK2P53671 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.84■□□□□ 0.61
LIMK2P53671 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 AC073592.3-201ENST00000625118 1834 ntBASIC18.84■□□□□ 0.61
LIMK2P53671 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 MESTP1-201ENST00000404287 994 ntBASIC18.84■□□□□ 0.61
LIMK2P53671 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.84■□□□□ 0.61
LIMK2P53671 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.84■□□□□ 0.61
LIMK2P53671 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.84■□□□□ 0.61
LIMK2P53671 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.84■□□□□ 0.61
LIMK2P53671 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.84■□□□□ 0.61
LIMK2P53671 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.84■□□□□ 0.61
LIMK2P53671 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.84■□□□□ 0.61
LIMK2P53671 AC010947.1-201ENST00000623454 693 ntBASIC18.84■□□□□ 0.61
LIMK2P53671 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.84■□□□□ 0.61
LIMK2P53671 AC092865.7-201ENST00000641832 219 ntBASIC18.84■□□□□ 0.61
LIMK2P53671 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LIMK2P53671 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LIMK2P53671 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LIMK2P53671 RCC2P6-201ENST00000526625 1557 ntBASIC18.84■□□□□ 0.61
LIMK2P53671 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.84■□□□□ 0.61
LIMK2P53671 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LIMK2P53671 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.84■□□□□ 0.61
LIMK2P53671 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LIMK2P53671 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LIMK2P53671 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
LIMK2P53671 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LIMK2P53671 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LIMK2P53671 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.83■□□□□ 0.61
LIMK2P53671 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LIMK2P53671 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
LIMK2P53671 KRT18P22-201ENST00000402024 1347 ntBASIC18.83■□□□□ 0.61
LIMK2P53671 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LIMK2P53671 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.83■□□□□ 0.6
LIMK2P53671 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LIMK2P53671 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
LIMK2P53671 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.83■□□□□ 0.6
LIMK2P53671 AC131212.4-201ENST00000623606 975 ntBASIC18.83■□□□□ 0.6
LIMK2P53671 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LIMK2P53671 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LIMK2P53671 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.83■□□□□ 0.6
LIMK2P53671 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LIMK2P53671 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.83■□□□□ 0.6
LIMK2P53671 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LIMK2P53671 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIMK2P53671 AC020763.4-201ENST00000623414 4170 ntBASIC18.82■□□□□ 0.6
LIMK2P53671 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.82■□□□□ 0.6
LIMK2P53671 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIMK2P53671 AC126763.1-201ENST00000552015 2118 ntBASIC18.82■□□□□ 0.6
LIMK2P53671 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.82■□□□□ 0.6
LIMK2P53671 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIMK2P53671 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
LIMK2P53671 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.82■□□□□ 0.6
LIMK2P53671 AC004980.1-204ENST00000429707 299 ntBASIC18.82■□□□□ 0.6
LIMK2P53671 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIMK2P53671 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.82■□□□□ 0.6
LIMK2P53671 B3GAT3P1-201ENST00000471720 806 ntBASIC18.82■□□□□ 0.6
LIMK2P53671 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.82■□□□□ 0.6
LIMK2P53671 DGCR10-201ENST00000609839 495 ntBASIC18.82■□□□□ 0.6
LIMK2P53671 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIMK2P53671 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIMK2P53671 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIMK2P53671 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LIMK2P53671 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIMK2P53671 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LIMK2P53671 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LIMK2P53671 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIMK2P53671 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms