Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MRE11P49959 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.74■■□□□ 1.07
MRE11P49959 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MRE11P49959 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.74■■□□□ 1.07
MRE11P49959 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.74■■□□□ 1.07
MRE11P49959 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MRE11P49959 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.74■■□□□ 1.07
MRE11P49959 Z99916.2-201ENST00000604037 246 ntBASIC21.74■■□□□ 1.07
MRE11P49959 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.74■■□□□ 1.07
MRE11P49959 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.74■■□□□ 1.07
MRE11P49959 FAM197Y4-202ENST00000622692 608 ntBASIC21.74■■□□□ 1.07
MRE11P49959 MYC-209ENST00000641252 345 ntBASIC21.74■■□□□ 1.07
MRE11P49959 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.74■■□□□ 1.07
MRE11P49959 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MRE11P49959 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MRE11P49959 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MRE11P49959 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.74■■□□□ 1.07
MRE11P49959 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MRE11P49959 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MRE11P49959 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MRE11P49959 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
MRE11P49959 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
MRE11P49959 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MRE11P49959 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MRE11P49959 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MRE11P49959 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.73■■□□□ 1.07
MRE11P49959 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MRE11P49959 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.73■■□□□ 1.07
MRE11P49959 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.73■■□□□ 1.07
MRE11P49959 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.73■■□□□ 1.07
MRE11P49959 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.73■■□□□ 1.07
MRE11P49959 AC133561.5-201ENST00000635547 218 ntBASIC21.73■■□□□ 1.07
MRE11P49959 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MRE11P49959 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
MRE11P49959 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MRE11P49959 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRE11P49959 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MRE11P49959 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRE11P49959 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MRE11P49959 AL139384.1-201ENST00000612143 3047 ntBASIC21.72■■□□□ 1.07
MRE11P49959 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.72■■□□□ 1.07
MRE11P49959 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
MRE11P49959 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.72■■□□□ 1.07
MRE11P49959 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRE11P49959 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRE11P49959 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MRE11P49959 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
MRE11P49959 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.72■■□□□ 1.07
MRE11P49959 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.72■■□□□ 1.07
MRE11P49959 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
MRE11P49959 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRE11P49959 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MRE11P49959 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRE11P49959 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.72■■□□□ 1.07
MRE11P49959 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MRE11P49959 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MRE11P49959 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRE11P49959 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.72■■□□□ 1.07
MRE11P49959 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
MRE11P49959 AC083906.6-201ENST00000641366 219 ntBASIC21.72■■□□□ 1.07
MRE11P49959 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
MRE11P49959 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MRE11P49959 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MRE11P49959 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.72■■□□□ 1.07
MRE11P49959 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.72■■□□□ 1.07
MRE11P49959 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MRE11P49959 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
MRE11P49959 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MRE11P49959 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MRE11P49959 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MRE11P49959 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MRE11P49959 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.71■■□□□ 1.07
MRE11P49959 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MRE11P49959 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.71■■□□□ 1.07
MRE11P49959 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.71■■□□□ 1.07
MRE11P49959 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MRE11P49959 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.71■■□□□ 1.07
MRE11P49959 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.71■■□□□ 1.07
MRE11P49959 SLC25A6P5-201ENST00000435663 894 ntBASIC21.71■■□□□ 1.07
MRE11P49959 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.71■■□□□ 1.07
MRE11P49959 PRKY-204ENST00000533551 1019 ntBASIC21.71■■□□□ 1.07
MRE11P49959 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.71■■□□□ 1.07
MRE11P49959 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.71■■□□□ 1.07
MRE11P49959 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.71■■□□□ 1.07
MRE11P49959 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
MRE11P49959 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
MRE11P49959 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MRE11P49959 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
MRE11P49959 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
MRE11P49959 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
MRE11P49959 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.71■■□□□ 1.07
MRE11P49959 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MRE11P49959 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.71■■□□□ 1.07
MRE11P49959 RBM17P2-201ENST00000616397 1405 ntBASIC21.71■■□□□ 1.07
MRE11P49959 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
MRE11P49959 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MRE11P49959 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC21.71■■□□□ 1.07
MRE11P49959 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
MRE11P49959 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
MRE11P49959 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms