Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC5P40937 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.62■□□□□ 0.89
RFC5P40937 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.62■□□□□ 0.89
RFC5P40937 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RFC5P40937 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RFC5P40937 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.61■□□□□ 0.89
RFC5P40937 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC5P40937 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC5P40937 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFC5P40937 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC5P40937 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC5P40937 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.61■□□□□ 0.89
RFC5P40937 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.61■□□□□ 0.89
RFC5P40937 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.61■□□□□ 0.89
RFC5P40937 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
RFC5P40937 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RFC5P40937 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.61■□□□□ 0.89
RFC5P40937 KRT18P41-201ENST00000518924 1277 ntBASIC20.61■□□□□ 0.89
RFC5P40937 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.61■□□□□ 0.89
RFC5P40937 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.61■□□□□ 0.89
RFC5P40937 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC5P40937 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.61■□□□□ 0.89
RFC5P40937 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC5P40937 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.61■□□□□ 0.89
RFC5P40937 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFC5P40937 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC5P40937 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFC5P40937 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.61■□□□□ 0.89
RFC5P40937 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC5P40937 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC5P40937 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RFC5P40937 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC5P40937 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC5P40937 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC5P40937 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC5P40937 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.6■□□□□ 0.89
RFC5P40937 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC5P40937 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC5P40937 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.6■□□□□ 0.89
RFC5P40937 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC5P40937 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
RFC5P40937 AL157888.1-201ENST00000631930 593 ntBASIC20.6■□□□□ 0.89
RFC5P40937 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RFC5P40937 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RFC5P40937 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFC5P40937 LINC01311-201ENST00000565162 1445 ntBASIC20.6■□□□□ 0.89
RFC5P40937 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
RFC5P40937 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.6■□□□□ 0.89
RFC5P40937 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
RFC5P40937 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RFC5P40937 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC5P40937 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.59■□□□□ 0.89
RFC5P40937 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFC5P40937 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.59■□□□□ 0.89
RFC5P40937 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.59■□□□□ 0.89
RFC5P40937 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.59■□□□□ 0.89
RFC5P40937 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.59■□□□□ 0.89
RFC5P40937 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC5P40937 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC5P40937 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFC5P40937 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC5P40937 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.59■□□□□ 0.89
RFC5P40937 ZNF444P1-201ENST00000559497 298 ntBASIC20.59■□□□□ 0.89
RFC5P40937 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.59■□□□□ 0.89
RFC5P40937 AC083849.1-201ENST00000615227 514 ntBASIC20.59■□□□□ 0.89
RFC5P40937 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.59■□□□□ 0.89
RFC5P40937 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.59■□□□□ 0.89
RFC5P40937 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RFC5P40937 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC5P40937 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC5P40937 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC5P40937 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RFC5P40937 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFC5P40937 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.59■□□□□ 0.89
RFC5P40937 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFC5P40937 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC5P40937 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC5P40937 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
RFC5P40937 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RFC5P40937 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFC5P40937 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.58■□□□□ 0.89
RFC5P40937 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.58■□□□□ 0.89
RFC5P40937 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RFC5P40937 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.58■□□□□ 0.89
RFC5P40937 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC5P40937 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFC5P40937 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFC5P40937 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.58■□□□□ 0.89
RFC5P40937 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RFC5P40937 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFC5P40937 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC5P40937 HBZP1-201ENST00000354915 429 ntBASIC20.58■□□□□ 0.89
RFC5P40937 AP000593.1-201ENST00000393668 712 ntBASIC20.58■□□□□ 0.89
RFC5P40937 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC5P40937 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.58■□□□□ 0.89
RFC5P40937 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC5P40937 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.58■□□□□ 0.89
RFC5P40937 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms