Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.78■□□□□ 0.6
MDH1P40925 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MDH1P40925 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.78■□□□□ 0.6
MDH1P40925 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.78■□□□□ 0.6
MDH1P40925 AL355472.2-201ENST00000422958 438 ntBASIC18.78■□□□□ 0.6
MDH1P40925 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MDH1P40925 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.78■□□□□ 0.6
MDH1P40925 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.78■□□□□ 0.6
MDH1P40925 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MDH1P40925 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
MDH1P40925 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.78■□□□□ 0.6
MDH1P40925 MTMR9LP-203ENST00000426597 1545 ntBASIC18.78■□□□□ 0.6
MDH1P40925 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.78■□□□□ 0.6
MDH1P40925 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MDH1P40925 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MDH1P40925 AC018695.7-201ENST00000624587 2492 ntBASIC18.78■□□□□ 0.6
MDH1P40925 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MDH1P40925 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MDH1P40925 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MDH1P40925 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MDH1P40925 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
MDH1P40925 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MDH1P40925 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.77■□□□□ 0.6
MDH1P40925 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
MDH1P40925 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MDH1P40925 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MDH1P40925 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MDH1P40925 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
MDH1P40925 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MDH1P40925 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.77■□□□□ 0.6
MDH1P40925 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MDH1P40925 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.77■□□□□ 0.6
MDH1P40925 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MDH1P40925 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MDH1P40925 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MDH1P40925 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MDH1P40925 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MDH1P40925 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MDH1P40925 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MDH1P40925 AC123595.1-201ENST00000440769 1046 ntBASIC18.77■□□□□ 0.6
MDH1P40925 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
MDH1P40925 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.77■□□□□ 0.6
MDH1P40925 SUDS3P1-201ENST00000505831 966 ntBASIC18.77■□□□□ 0.6
MDH1P40925 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.77■□□□□ 0.6
MDH1P40925 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MDH1P40925 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
MDH1P40925 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.77■□□□□ 0.6
MDH1P40925 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.77■□□□□ 0.6
MDH1P40925 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MDH1P40925 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
MDH1P40925 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
MDH1P40925 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MDH1P40925 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
MDH1P40925 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.76■□□□□ 0.59
MDH1P40925 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.76■□□□□ 0.59
MDH1P40925 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.76■□□□□ 0.59
MDH1P40925 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.76■□□□□ 0.59
MDH1P40925 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.76■□□□□ 0.59
MDH1P40925 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.76■□□□□ 0.59
MDH1P40925 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.76■□□□□ 0.59
MDH1P40925 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.76■□□□□ 0.59
MDH1P40925 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
MDH1P40925 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.76■□□□□ 0.59
MDH1P40925 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.76■□□□□ 0.59
MDH1P40925 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.76■□□□□ 0.59
MDH1P40925 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.76■□□□□ 0.59
MDH1P40925 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
MDH1P40925 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
MDH1P40925 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.76■□□□□ 0.59
MDH1P40925 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MDH1P40925 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MDH1P40925 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MDH1P40925 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MDH1P40925 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MDH1P40925 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MDH1P40925 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MDH1P40925 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MDH1P40925 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
MDH1P40925 AP001094.4-201ENST00000579008 2176 ntBASIC18.75■□□□□ 0.59
MDH1P40925 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MDH1P40925 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MDH1P40925 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.75■□□□□ 0.59
MDH1P40925 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MDH1P40925 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms