Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA3P32297 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CHRNA3P32297 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA3P32297 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CHRNA3P32297 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.71■□□□□ 0.75
CHRNA3P32297 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA3P32297 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA3P32297 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.71■□□□□ 0.75
CHRNA3P32297 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA3P32297 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA3P32297 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CHRNA3P32297 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA3P32297 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.71■□□□□ 0.75
CHRNA3P32297 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CHRNA3P32297 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA3P32297 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CHRNA3P32297 AL133373.2-201ENST00000623187 2828 ntBASIC19.71■□□□□ 0.74
CHRNA3P32297 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNA3P32297 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CHRNA3P32297 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CHRNA3P32297 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.7■□□□□ 0.74
CHRNA3P32297 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNA3P32297 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 AC116562.2-201ENST00000507042 360 ntBASIC19.7■□□□□ 0.74
CHRNA3P32297 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNA3P32297 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNA3P32297 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNA3P32297 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CHRNA3P32297 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHRNA3P32297 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.7■□□□□ 0.74
CHRNA3P32297 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.7■□□□□ 0.74
CHRNA3P32297 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CHRNA3P32297 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNA3P32297 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNA3P32297 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNA3P32297 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA3P32297 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA3P32297 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA3P32297 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CHRNA3P32297 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA3P32297 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.69■□□□□ 0.74
CHRNA3P32297 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CHRNA3P32297 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA3P32297 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA3P32297 ABALON-201ENST00000629058 1903 ntBASIC19.69■□□□□ 0.74
CHRNA3P32297 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.69■□□□□ 0.74
CHRNA3P32297 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA3P32297 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA3P32297 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA3P32297 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.69■□□□□ 0.74
CHRNA3P32297 AC211429.1-201ENST00000415277 523 ntBASIC19.69■□□□□ 0.74
CHRNA3P32297 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.69■□□□□ 0.74
CHRNA3P32297 RBM17P1-201ENST00000453646 1190 ntBASIC19.69■□□□□ 0.74
CHRNA3P32297 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.69■□□□□ 0.74
CHRNA3P32297 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.69■□□□□ 0.74
CHRNA3P32297 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.69■□□□□ 0.74
CHRNA3P32297 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.69■□□□□ 0.74
CHRNA3P32297 HLA-A-209ENST00000638375 975 ntBASIC19.69■□□□□ 0.74
CHRNA3P32297 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA3P32297 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA3P32297 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.69■□□□□ 0.74
CHRNA3P32297 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA3P32297 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA3P32297 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA3P32297 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA3P32297 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA3P32297 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA3P32297 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.68■□□□□ 0.74
CHRNA3P32297 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA3P32297 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA3P32297 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CHRNA3P32297 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA3P32297 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CHRNA3P32297 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.68■□□□□ 0.74
CHRNA3P32297 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA3P32297 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.68■□□□□ 0.74
CHRNA3P32297 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CHRNA3P32297 AC004980.1-204ENST00000429707 299 ntBASIC19.68■□□□□ 0.74
CHRNA3P32297 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNA3P32297 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.68■□□□□ 0.74
CHRNA3P32297 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms