Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 DANCR-204ENST00000444958 709 ntTSL 3 BASIC24.43■■□□□ 1.5
RXRBP28702 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC24.43■■□□□ 1.5
RXRBP28702 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC24.43■■□□□ 1.5
RXRBP28702 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC24.43■■□□□ 1.5
RXRBP28702 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
RXRBP28702 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC24.43■■□□□ 1.5
RXRBP28702 AC012645.4-201ENST00000610691 1061 ntBASIC24.43■■□□□ 1.5
RXRBP28702 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC24.43■■□□□ 1.5
RXRBP28702 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC24.43■■□□□ 1.5
RXRBP28702 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC24.43■■□□□ 1.5
RXRBP28702 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RXRBP28702 GUSBP5-202ENST00000510805 1989 ntBASIC24.43■■□□□ 1.5
RXRBP28702 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RXRBP28702 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC24.42■■□□□ 1.5
RXRBP28702 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
RXRBP28702 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
RXRBP28702 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RXRBP28702 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RXRBP28702 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RXRBP28702 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC24.42■■□□□ 1.5
RXRBP28702 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RXRBP28702 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC24.42■■□□□ 1.5
RXRBP28702 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC24.42■■□□□ 1.5
RXRBP28702 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC24.42■■□□□ 1.5
RXRBP28702 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RXRBP28702 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC24.42■■□□□ 1.5
RXRBP28702 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC24.42■■□□□ 1.5
RXRBP28702 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC24.42■■□□□ 1.5
RXRBP28702 METTL23-205ENST00000588302 925 ntTSL 5 BASIC24.42■■□□□ 1.5
RXRBP28702 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC24.42■■□□□ 1.5
RXRBP28702 AC092865.6-201ENST00000642101 219 ntBASIC24.42■■□□□ 1.5
RXRBP28702 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RXRBP28702 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
RXRBP28702 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
RXRBP28702 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RXRBP28702 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC24.41■■□□□ 1.5
RXRBP28702 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.41■■□□□ 1.5
RXRBP28702 AC097374.2-201ENST00000618617 1306 ntBASIC24.41■■□□□ 1.5
RXRBP28702 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RXRBP28702 AL139400.1-201ENST00000366220 510 ntBASIC24.41■■□□□ 1.5
RXRBP28702 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RXRBP28702 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC24.41■■□□□ 1.5
RXRBP28702 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC24.41■■□□□ 1.5
RXRBP28702 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC24.41■■□□□ 1.5
RXRBP28702 AC069262.1-201ENST00000539058 672 ntBASIC24.41■■□□□ 1.5
RXRBP28702 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC24.41■■□□□ 1.5
RXRBP28702 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC24.41■■□□□ 1.5
RXRBP28702 AL008721.1-201ENST00000609964 604 ntBASIC24.41■■□□□ 1.5
RXRBP28702 AL513190.1-201ENST00000621254 727 ntBASIC24.41■■□□□ 1.5
RXRBP28702 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RXRBP28702 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC24.41■■□□□ 1.5
RXRBP28702 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
RXRBP28702 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
RXRBP28702 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
RXRBP28702 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RXRBP28702 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RXRBP28702 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
RXRBP28702 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RXRBP28702 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
RXRBP28702 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RXRBP28702 RCC2P3-201ENST00000418112 1537 ntBASIC24.4■■□□□ 1.5
RXRBP28702 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
RXRBP28702 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC24.4■■□□□ 1.5
RXRBP28702 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC24.4■■□□□ 1.5
RXRBP28702 RNF34-208ENST00000555076 593 ntTSL 3 BASIC24.4■■□□□ 1.5
RXRBP28702 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC24.4■■□□□ 1.5
RXRBP28702 NKAPP1-205ENST00000585790 367 ntBASIC24.4■■□□□ 1.5
RXRBP28702 Z92544.3-201ENST00000624747 417 ntBASIC24.4■■□□□ 1.5
RXRBP28702 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RXRBP28702 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
RXRBP28702 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
RXRBP28702 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
RXRBP28702 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
RXRBP28702 AC079834.2-201ENST00000609776 1949 ntBASIC24.39■■□□□ 1.5
RXRBP28702 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC24.39■■□□□ 1.5
RXRBP28702 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.39■■□□□ 1.5
RXRBP28702 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.39■■□□□ 1.5
RXRBP28702 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RXRBP28702 ENSA-205ENST00000361532 792 ntTSL 2 BASIC24.39■■□□□ 1.49
RXRBP28702 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC24.39■■□□□ 1.49
RXRBP28702 GSAP-205ENST00000430584 600 ntTSL 5 BASIC24.39■■□□□ 1.49
RXRBP28702 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC24.39■■□□□ 1.49
RXRBP28702 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC24.39■■□□□ 1.49
RXRBP28702 AC005225.4-201ENST00000557330 545 ntBASIC24.39■■□□□ 1.49
RXRBP28702 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
RXRBP28702 AL078644.1-201ENST00000609881 752 ntBASIC24.39■■□□□ 1.49
RXRBP28702 ANKRD20A8P-203ENST00000641373 517 ntBASIC24.39■■□□□ 1.49
RXRBP28702 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RXRBP28702 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
RXRBP28702 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.39■■□□□ 1.49
RXRBP28702 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
RXRBP28702 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RXRBP28702 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC24.38■■□□□ 1.49
RXRBP28702 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RXRBP28702 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RXRBP28702 LAGE3P1-201ENST00000425356 484 ntBASIC24.38■■□□□ 1.49
RXRBP28702 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC24.38■■□□□ 1.49
RXRBP28702 MEG3-211ENST00000452514 461 ntTSL 3 BASIC24.38■■□□□ 1.49
RXRBP28702 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC24.38■■□□□ 1.49
RXRBP28702 AC004449.1-201ENST00000564240 433 ntBASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms