Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
XPAP23025 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
XPAP23025 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.85■□□□□ 0.61
XPAP23025 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
XPAP23025 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
XPAP23025 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
XPAP23025 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
XPAP23025 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.85■□□□□ 0.61
XPAP23025 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
XPAP23025 TSPY5P-201ENST00000426936 936 ntBASIC18.85■□□□□ 0.61
XPAP23025 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.85■□□□□ 0.61
XPAP23025 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
XPAP23025 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.85■□□□□ 0.61
XPAP23025 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.85■□□□□ 0.61
XPAP23025 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.85■□□□□ 0.61
XPAP23025 PKD1P1-201ENST00000458669 6805 ntBASIC18.85■□□□□ 0.61
XPAP23025 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.85■□□□□ 0.61
XPAP23025 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.85■□□□□ 0.61
XPAP23025 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
XPAP23025 AL161938.1-201ENST00000569833 2180 ntBASIC18.85■□□□□ 0.61
XPAP23025 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
XPAP23025 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
XPAP23025 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
XPAP23025 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
XPAP23025 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.84■□□□□ 0.61
XPAP23025 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
XPAP23025 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.84■□□□□ 0.61
XPAP23025 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
XPAP23025 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
XPAP23025 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
XPAP23025 ARMC10P1-201ENST00000313754 855 ntBASIC18.84■□□□□ 0.61
XPAP23025 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.84■□□□□ 0.61
XPAP23025 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
XPAP23025 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.84■□□□□ 0.61
XPAP23025 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
XPAP23025 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.84■□□□□ 0.61
XPAP23025 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.84■□□□□ 0.61
XPAP23025 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.84■□□□□ 0.61
XPAP23025 AC011558.1-201ENST00000623459 338 ntBASIC18.84■□□□□ 0.61
XPAP23025 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.84■□□□□ 0.61
XPAP23025 AL109659.2-201ENST00000606809 1674 ntBASIC18.84■□□□□ 0.61
XPAP23025 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
XPAP23025 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
XPAP23025 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
XPAP23025 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.84■□□□□ 0.61
XPAP23025 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
XPAP23025 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
XPAP23025 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.84■□□□□ 0.61
XPAP23025 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
XPAP23025 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
XPAP23025 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
XPAP23025 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
XPAP23025 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
XPAP23025 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
XPAP23025 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
XPAP23025 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
XPAP23025 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
XPAP23025 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.83■□□□□ 0.6
XPAP23025 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
XPAP23025 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
XPAP23025 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.83■□□□□ 0.6
XPAP23025 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
XPAP23025 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
XPAP23025 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.83■□□□□ 0.6
XPAP23025 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
XPAP23025 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
XPAP23025 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
XPAP23025 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
XPAP23025 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
XPAP23025 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.83■□□□□ 0.6
XPAP23025 KRT8P32-201ENST00000512863 1461 ntBASIC18.83■□□□□ 0.6
XPAP23025 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
XPAP23025 OR6D1P-202ENST00000641007 5290 ntBASIC18.82■□□□□ 0.6
XPAP23025 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
XPAP23025 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.82■□□□□ 0.6
XPAP23025 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.82■□□□□ 0.6
XPAP23025 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.82■□□□□ 0.6
XPAP23025 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
XPAP23025 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
XPAP23025 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.82■□□□□ 0.6
XPAP23025 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
XPAP23025 AC022616.7-201ENST00000525383 220 ntBASIC18.82■□□□□ 0.6
XPAP23025 NTF6B-201ENST00000591913 560 ntBASIC18.82■□□□□ 0.6
XPAP23025 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
XPAP23025 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
XPAP23025 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
XPAP23025 AC008556.1-201ENST00000610908 2040 ntBASIC18.82■□□□□ 0.6
XPAP23025 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
XPAP23025 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.82■□□□□ 0.6
XPAP23025 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
XPAP23025 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
XPAP23025 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
XPAP23025 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
XPAP23025 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
XPAP23025 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.82■□□□□ 0.6
XPAP23025 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
XPAP23025 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
XPAP23025 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
XPAP23025 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
XPAP23025 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms