Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL1P22362 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL1P22362 AC093677.2-201ENST00000600169 1863 ntBASIC16.1■□□□□ 0.17
CCL1P22362 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCL1P22362 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL1P22362 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL1P22362 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL1P22362 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCL1P22362 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CCL1P22362 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.09■□□□□ 0.17
CCL1P22362 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.09■□□□□ 0.17
CCL1P22362 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL1P22362 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL1P22362 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL1P22362 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCL1P22362 MIR564-202ENST00000385049 94 ntBASIC16.09■□□□□ 0.17
CCL1P22362 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL1P22362 FAM197Y1-201ENST00000421178 764 ntBASIC16.09■□□□□ 0.17
CCL1P22362 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL1P22362 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.09■□□□□ 0.17
CCL1P22362 AC116562.2-201ENST00000507042 360 ntBASIC16.09■□□□□ 0.17
CCL1P22362 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CCL1P22362 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL1P22362 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.09■□□□□ 0.17
CCL1P22362 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.09■□□□□ 0.17
CCL1P22362 FAM197Y4-202ENST00000622692 608 ntBASIC16.09■□□□□ 0.17
CCL1P22362 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL1P22362 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CCL1P22362 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL1P22362 AC135776.1-201ENST00000319817 2481 ntBASIC16.09■□□□□ 0.17
CCL1P22362 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL1P22362 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.09■□□□□ 0.17
CCL1P22362 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CCL1P22362 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL1P22362 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL1P22362 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL1P22362 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL1P22362 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL1P22362 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CCL1P22362 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL1P22362 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL1P22362 LETM1P2-201ENST00000597330 2178 ntBASIC16.09■□□□□ 0.17
CCL1P22362 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.08■□□□□ 0.17
CCL1P22362 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.08■□□□□ 0.17
CCL1P22362 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCL1P22362 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.08■□□□□ 0.17
CCL1P22362 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCL1P22362 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.17
CCL1P22362 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCL1P22362 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCL1P22362 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL1P22362 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL1P22362 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.08■□□□□ 0.16
CCL1P22362 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 AL023284.2-201ENST00000405850 579 ntBASIC16.08■□□□□ 0.16
CCL1P22362 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL1P22362 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.08■□□□□ 0.16
CCL1P22362 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CCL1P22362 CD177P1-201ENST00000606252 935 ntBASIC16.08■□□□□ 0.16
CCL1P22362 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.08■□□□□ 0.16
CCL1P22362 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
CCL1P22362 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL1P22362 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCL1P22362 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCL1P22362 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL1P22362 AC068880.1-201ENST00000507289 2297 ntBASIC16.07■□□□□ 0.16
CCL1P22362 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL1P22362 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCL1P22362 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL1P22362 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.07■□□□□ 0.16
CCL1P22362 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL1P22362 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.07■□□□□ 0.16
CCL1P22362 CA15P1-201ENST00000481698 905 ntBASIC16.07■□□□□ 0.16
CCL1P22362 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.07■□□□□ 0.16
CCL1P22362 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.07■□□□□ 0.16
CCL1P22362 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.07■□□□□ 0.16
CCL1P22362 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.07■□□□□ 0.16
CCL1P22362 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.07■□□□□ 0.16
CCL1P22362 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCL1P22362 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.07■□□□□ 0.16
CCL1P22362 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CCL1P22362 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCL1P22362 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CCL1P22362 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CCL1P22362 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCL1P22362 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms