Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VCLP18206 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.78■□□□□ 0.6
VCLP18206 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VCLP18206 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.78■□□□□ 0.6
VCLP18206 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.78■□□□□ 0.6
VCLP18206 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 CKBP1-201ENST00000565489 1086 ntBASIC18.78■□□□□ 0.6
VCLP18206 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.78■□□□□ 0.6
VCLP18206 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
VCLP18206 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCLP18206 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.78■□□□□ 0.6
VCLP18206 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VCLP18206 AC009113.1-201ENST00000570267 2443 ntBASIC18.78■□□□□ 0.6
VCLP18206 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.77■□□□□ 0.6
VCLP18206 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCLP18206 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCLP18206 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCLP18206 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
VCLP18206 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.77■□□□□ 0.6
VCLP18206 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCLP18206 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCLP18206 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
VCLP18206 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VCLP18206 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.77■□□□□ 0.6
VCLP18206 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.77■□□□□ 0.6
VCLP18206 CROCCP3-202ENST00000420820 1947 ntBASIC18.77■□□□□ 0.6
VCLP18206 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCLP18206 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VCLP18206 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
VCLP18206 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCLP18206 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VCLP18206 AC211429.1-201ENST00000415277 523 ntBASIC18.77■□□□□ 0.6
VCLP18206 AC128688.1-201ENST00000487626 519 ntBASIC18.77■□□□□ 0.6
VCLP18206 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
VCLP18206 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.77■□□□□ 0.6
VCLP18206 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCLP18206 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
VCLP18206 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
VCLP18206 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCLP18206 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCLP18206 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.77■□□□□ 0.6
VCLP18206 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCLP18206 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCLP18206 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.77■□□□□ 0.6
VCLP18206 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VCLP18206 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VCLP18206 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.59
VCLP18206 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
VCLP18206 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.77■□□□□ 0.59
VCLP18206 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
VCLP18206 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VCLP18206 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCLP18206 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCLP18206 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VCLP18206 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VCLP18206 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.76■□□□□ 0.59
VCLP18206 KRT8P11-201ENST00000409686 1436 ntBASIC18.76■□□□□ 0.59
VCLP18206 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
VCLP18206 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCLP18206 AC135050.7-201ENST00000624508 2218 ntBASIC18.76■□□□□ 0.59
VCLP18206 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCLP18206 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VCLP18206 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.76■□□□□ 0.59
VCLP18206 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.76■□□□□ 0.59
VCLP18206 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VCLP18206 CCR12P-201ENST00000446203 998 ntBASIC18.76■□□□□ 0.59
VCLP18206 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.76■□□□□ 0.59
VCLP18206 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCLP18206 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VCLP18206 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.76■□□□□ 0.59
VCLP18206 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCLP18206 LINC01568-207ENST00000641790 1380 ntBASIC18.76■□□□□ 0.59
VCLP18206 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.76■□□□□ 0.59
VCLP18206 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCLP18206 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
VCLP18206 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VCLP18206 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
VCLP18206 KRT18P22-201ENST00000402024 1347 ntBASIC18.75■□□□□ 0.59
VCLP18206 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCLP18206 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCLP18206 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VCLP18206 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.75■□□□□ 0.59
VCLP18206 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.75■□□□□ 0.59
VCLP18206 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VCLP18206 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
VCLP18206 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
VCLP18206 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCLP18206 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.75■□□□□ 0.59
VCLP18206 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms