Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
ATP2A2P16615 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
ATP2A2P16615 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ATP2A2P16615 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP2A2P16615 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A2P16615 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A2P16615 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A2P16615 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A2P16615 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP2A2P16615 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP2A2P16615 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A2P16615 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A2P16615 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
ATP2A2P16615 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP2A2P16615 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A2P16615 AC024243.1-201ENST00000609234 778 ntBASIC20.61■□□□□ 0.89
ATP2A2P16615 AL732292.2-201ENST00000609649 430 ntBASIC20.61■□□□□ 0.89
ATP2A2P16615 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
ATP2A2P16615 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.61■□□□□ 0.89
ATP2A2P16615 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A2P16615 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A2P16615 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP2A2P16615 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ATP2A2P16615 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP2A2P16615 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A2P16615 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ATP2A2P16615 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A2P16615 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A2P16615 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
ATP2A2P16615 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ATP2A2P16615 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.6■□□□□ 0.89
ATP2A2P16615 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ATP2A2P16615 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ATP2A2P16615 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A2P16615 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A2P16615 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A2P16615 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A2P16615 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A2P16615 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP2A2P16615 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A2P16615 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP2A2P16615 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A2P16615 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ATP2A2P16615 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATP2A2P16615 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.6■□□□□ 0.89
ATP2A2P16615 CHCHD2P8-201ENST00000429873 447 ntBASIC20.6■□□□□ 0.89
ATP2A2P16615 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP2A2P16615 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A2P16615 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATP2A2P16615 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.6■□□□□ 0.89
ATP2A2P16615 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.6■□□□□ 0.89
ATP2A2P16615 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A2P16615 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP2A2P16615 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATP2A2P16615 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ATP2A2P16615 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A2P16615 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ATP2A2P16615 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATP2A2P16615 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A2P16615 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ATP2A2P16615 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A2P16615 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATP2A2P16615 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A2P16615 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A2P16615 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A2P16615 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A2P16615 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A2P16615 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
ATP2A2P16615 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ATP2A2P16615 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A2P16615 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A2P16615 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ATP2A2P16615 AP000593.1-201ENST00000393668 712 ntBASIC20.59■□□□□ 0.89
ATP2A2P16615 TSPY19P-201ENST00000418461 509 ntBASIC20.59■□□□□ 0.89
ATP2A2P16615 TSPY18P-201ENST00000441642 509 ntBASIC20.59■□□□□ 0.89
ATP2A2P16615 AL160237.2-201ENST00000556165 472 ntBASIC20.59■□□□□ 0.89
ATP2A2P16615 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP2A2P16615 AC104692.2-201ENST00000603054 253 ntBASIC20.59■□□□□ 0.89
ATP2A2P16615 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A2P16615 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A2P16615 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ATP2A2P16615 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP2A2P16615 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A2P16615 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A2P16615 AL162741.1-201ENST00000565563 1558 ntBASIC20.59■□□□□ 0.89
ATP2A2P16615 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A2P16615 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP2A2P16615 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A2P16615 KRT18P1-202ENST00000452408 1331 ntBASIC20.58■□□□□ 0.89
ATP2A2P16615 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
ATP2A2P16615 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A2P16615 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP2A2P16615 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A2P16615 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ATP2A2P16615 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.58■□□□□ 0.89
ATP2A2P16615 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A2P16615 AC091304.2-201ENST00000564639 760 ntBASIC20.58■□□□□ 0.89
ATP2A2P16615 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A2P16615 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP2A2P16615 LINC01711-201ENST00000598340 967 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms