| MUC1 | P15941 | AC003005.1-201 | ENST00000601674 | 582 nt | APPRIS P5 TSL 2 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | SQSTM1-216 | ENST00000626660 | 274 nt | TSL 5 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | LINC01819-201 | ENST00000422351 | 2156 nt | TSL 5 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | UBE2K-203 | ENST00000445950 | 2175 nt | TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | POMT2-201 | ENST00000261534 | 4876 nt | APPRIS P1 TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | UPP1-201 | ENST00000331803 | 1932 nt | APPRIS P1 TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | CROCCP3-202 | ENST00000420820 | 1947 nt | BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | FXYD6-211 | ENST00000539526 | 2132 nt | APPRIS P2 TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | AC026412.3-201 | ENST00000605200 | 1661 nt | TSL 5 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | KLHL23-201 | ENST00000272797 | 2087 nt | APPRIS P1 TSL 2 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | PDCD10-201 | ENST00000392750 | 2067 nt | APPRIS P1 TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | FAM46A-203 | ENST00000369756 | 5537 nt | APPRIS ALT2 TSL 1 (best) BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ASNS-206 | ENST00000437628 | 1638 nt | TSL 2 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | GCOM1-202 | ENST00000380569 | 1846 nt | APPRIS P3 TSL 2 BASIC | 16.01 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | SLC25A39-202 | ENST00000377095 | 1565 nt | APPRIS ALT1 TSL 1 (best) BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | NR1H2-201 | ENST00000253727 | 1998 nt | APPRIS P2 TSL 1 (best) BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | FIP1L1-202 | ENST00000337488 | 2198 nt | TSL 1 (best) BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | NRBP1-203 | ENST00000379852 | 2163 nt | APPRIS P1 TSL 1 (best) BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | JAKMIP1-202 | ENST00000409021 | 2975 nt | TSL 1 (best) BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | MARC2-202 | ENST00000366913 | 2134 nt | APPRIS P1 TSL 1 (best) BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ITGB7-209 | ENST00000550743 | 2138 nt | TSL 5 BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | HNF1A-202 | ENST00000400024 | 2337 nt | TSL 2 BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | TCF7-204 | ENST00000395029 | 3330 nt | APPRIS ALT2 TSL 5 BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | AC012313.1-201 | ENST00000593393 | 3059 nt | BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | KCNK4-202 | ENST00000422670 | 1697 nt | APPRIS P1 TSL 1 (best) BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | AL445645.1-201 | ENST00000451318 | 1019 nt | TSL 2 BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | PACRGL-207 | ENST00000502938 | 810 nt | TSL 4 BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | AL031600.3-201 | ENST00000566287 | 1124 nt | TSL 5 BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | CIRBP-217 | ENST00000588230 | 1013 nt | TSL 5 BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | PDCD5-207 | ENST00000590247 | 699 nt | APPRIS P1 TSL 1 (best) BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ZNF667-AS1-206 | ENST00000591797 | 535 nt | TSL 5 BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | C16orf74-202 | ENST00000602583 | 1237 nt | APPRIS ALT2 TSL 1 (best) BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | OAZ1-211 | ENST00000602676 | 1148 nt | APPRIS P3 TSL 5 BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | SNX21-213 | ENST00000614929 | 587 nt | TSL 5 BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | TMEM198B-203 | ENST00000482378 | 2230 nt | TSL 1 (best) BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ASMTL-201 | ENST00000381317 | 2027 nt | APPRIS P3 TSL 1 (best) BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | FAM20A-205 | ENST00000592554 | 2955 nt | APPRIS P1 TSL 1 (best) BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | TFEB-201 | ENST00000230323 | 2354 nt | APPRIS P1 TSL 1 (best) BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | KRT8P11-201 | ENST00000409686 | 1436 nt | BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ARHGAP22-210 | ENST00000477708 | 1951 nt | TSL 1 (best) BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ZBTB45-202 | ENST00000594051 | 2541 nt | APPRIS P1 TSL 2 BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | OGFOD2-201 | ENST00000228922 | 1780 nt | APPRIS P1 TSL 1 (best) BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | NCK2-205 | ENST00000451463 | 1795 nt | TSL 2 BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | SEPT2-245 | ENST00000616972 | 3446 nt | TSL 2 BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | LRRC4B-202 | ENST00000599957 | 3019 nt | APPRIS P1 TSL 3 BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | AC096733.2-201 | ENST00000609937 | 1394 nt | BASIC | 16 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | KTI12-201 | ENST00000371614 | 1714 nt | APPRIS P1 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | EIF3C-211 | ENST00000566866 | 2986 nt | APPRIS P1 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ACTL6B-201 | ENST00000160382 | 1537 nt | APPRIS P1 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | LRRN4CL-201 | ENST00000317449 | 2585 nt | APPRIS P1 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | GNE-201 | ENST00000377902 | 2565 nt | APPRIS P1 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | AC011270.2-201 | ENST00000624293 | 2550 nt | BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | GRK6-201 | ENST00000355472 | 2939 nt | APPRIS P3 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | MICU3-201 | ENST00000318063 | 3992 nt | APPRIS P2 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | SMN1-209 | ENST00000514951 | 1308 nt | TSL 2 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | AC027031.2-201 | ENST00000521369 | 1318 nt | TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | C21orf58-205 | ENST00000397683 | 1674 nt | APPRIS ALT2 TSL 2 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | FAM131A-204 | ENST00000418281 | 1664 nt | TSL 5 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | PIGV-201 | ENST00000078527 | 2367 nt | APPRIS P1 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | NUDT4-202 | ENST00000415493 | 4839 nt | APPRIS ALT1 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | WNT5B-201 | ENST00000310594 | 2184 nt | APPRIS P1 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | SCOC-208 | ENST00000510586 | 2193 nt | APPRIS ALT1 TSL 5 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | GAS2L1P1-201 | ENST00000420145 | 1480 nt | BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | HSPB6-201 | ENST00000004982 | 1457 nt | APPRIS P1 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | AL139384.1-201 | ENST00000612143 | 3047 nt | BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | CDKN1B-201 | ENST00000228872 | 2657 nt | APPRIS P1 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | CAMK4-210 | ENST00000512453 | 1640 nt | APPRIS P1 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | MINOS1-NBL1-204 | ENST00000602662 | 1623 nt | APPRIS P1 TSL 2 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | CCM2-207 | ENST00000475551 | 2471 nt | APPRIS ALT2 TSL 2 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | DAB1-202 | ENST00000371230 | 1150 nt | TSL 5 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | RTBDN-202 | ENST00000393233 | 1000 nt | APPRIS ALT2 TSL 3 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | AC003982.1-201 | ENST00000477404 | 484 nt | TSL 2 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | AC097488.1-201 | ENST00000507834 | 756 nt | BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | AC008771.1-201 | ENST00000508000 | 1151 nt | TSL 2 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | NEURL1B-202 | ENST00000520919 | 1089 nt | TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | CDC42EP2-202 | ENST00000533419 | 1279 nt | APPRIS P1 TSL 3 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | COPS7A-215 | ENST00000543155 | 2127 nt | APPRIS P1 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | TESMIN-209 | ENST00000544963 | 1235 nt | TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | C12orf76-208 | ENST00000551185 | 496 nt | TSL 2 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | FOXN3-AS1-201 | ENST00000555562 | 1077 nt | TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ZNF667-AS1-208 | ENST00000594783 | 475 nt | TSL 3 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ASRGL1-211 | ENST00000628829 | 1161 nt | TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | RREB1-201 | ENST00000334984 | 5789 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | NOC2LP2-201 | ENST00000407594 | 1944 nt | BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | PIP5K1C-205 | ENST00000589578 | 2933 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | CEP85L-205 | ENST00000419517 | 2079 nt | APPRIS P3 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | GPRC5C-205 | ENST00000481232 | 1592 nt | TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | NPTX2-201 | ENST00000265634 | 2700 nt | APPRIS P1 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | FEM1AP3-201 | ENST00000403722 | 1741 nt | BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | SCRIB-201 | ENST00000320476 | 5143 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | BTBD11-201 | ENST00000280758 | 5767 nt | APPRIS P3 TSL 5 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ZNRF2-201 | ENST00000323037 | 3460 nt | APPRIS P1 TSL 1 (best) BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | SLC25A29-215 | ENST00000556505 | 1540 nt | TSL 2 BASIC | 15.99 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | FP475955.4-201 | ENST00000623131 | 1990 nt | BASIC | 15.98 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | ZNF395-211 | ENST00000523202 | 2068 nt | APPRIS P1 TSL 1 (best) BASIC | 15.98 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | APLP2-210 | ENST00000528499 | 2530 nt | TSL 1 (best) BASIC | 15.98 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | PJA1-202 | ENST00000374571 | 2672 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.98 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | DUSP1-201 | ENST00000239223 | 2019 nt | APPRIS P1 TSL 1 (best) BASIC | 15.98 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | P2RX5-202 | ENST00000345901 | 2031 nt | TSL 5 BASIC | 15.98 | ■□□□□ 0.15 | | |
| MUC1 | P15941 | RNF121-201 | ENST00000361756 | 2625 nt | APPRIS P1 TSL 1 (best) BASIC | 15.98 | ■□□□□ 0.15 | | |