Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
DEFA4P12838 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DEFA4P12838 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.21■□□□□ 0.03
DEFA4P12838 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DEFA4P12838 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DEFA4P12838 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DEFA4P12838 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.21■□□□□ 0.03
DEFA4P12838 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.21■□□□□ 0.03
DEFA4P12838 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DEFA4P12838 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DEFA4P12838 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DEFA4P12838 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DEFA4P12838 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
DEFA4P12838 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DEFA4P12838 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DEFA4P12838 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.21■□□□□ 0.03
DEFA4P12838 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.21■□□□□ 0.03
DEFA4P12838 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.21■□□□□ 0.03
DEFA4P12838 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DEFA4P12838 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DEFA4P12838 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.21■□□□□ 0.03
DEFA4P12838 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
DEFA4P12838 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.21■□□□□ 0.03
DEFA4P12838 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DEFA4P12838 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DEFA4P12838 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
DEFA4P12838 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.21■□□□□ 0.03
DEFA4P12838 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
DEFA4P12838 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
DEFA4P12838 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
DEFA4P12838 AC104417.2-201ENST00000562989 1793 ntBASIC15.21■□□□□ 0.02
DEFA4P12838 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
DEFA4P12838 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
DEFA4P12838 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
DEFA4P12838 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.2■□□□□ 0.02
DEFA4P12838 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
DEFA4P12838 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
DEFA4P12838 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.2■□□□□ 0.02
DEFA4P12838 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
DEFA4P12838 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.2■□□□□ 0.02
DEFA4P12838 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.2■□□□□ 0.02
DEFA4P12838 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.2■□□□□ 0.02
DEFA4P12838 AC069544.1-201ENST00000609399 999 ntBASIC15.2■□□□□ 0.02
DEFA4P12838 AL031598.1-201ENST00000561511 1773 ntBASIC15.2■□□□□ 0.02
DEFA4P12838 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 AC068880.1-201ENST00000507289 2297 ntBASIC15.2■□□□□ 0.02
DEFA4P12838 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.2■□□□□ 0.02
DEFA4P12838 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.2■□□□□ 0.02
DEFA4P12838 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA4P12838 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.2■□□□□ 0.02
DEFA4P12838 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
DEFA4P12838 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
DEFA4P12838 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
DEFA4P12838 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.2■□□□□ 0.02
DEFA4P12838 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
DEFA4P12838 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.19■□□□□ 0.02
DEFA4P12838 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA4P12838 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
DEFA4P12838 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA4P12838 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA4P12838 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.19■□□□□ 0.02
DEFA4P12838 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
DEFA4P12838 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA4P12838 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
DEFA4P12838 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
DEFA4P12838 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA4P12838 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.19■□□□□ 0.02
DEFA4P12838 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.19■□□□□ 0.02
DEFA4P12838 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
DEFA4P12838 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.19■□□□□ 0.02
DEFA4P12838 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA4P12838 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.19■□□□□ 0.02
DEFA4P12838 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA4P12838 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA4P12838 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
DEFA4P12838 AC239809.2-201ENST00000415381 517 ntBASIC15.19■□□□□ 0.02
DEFA4P12838 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.19■□□□□ 0.02
DEFA4P12838 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA4P12838 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA4P12838 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.19■□□□□ 0.02
DEFA4P12838 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.19■□□□□ 0.02
DEFA4P12838 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
DEFA4P12838 AC008403.3-201ENST00000598924 454 ntBASIC15.19■□□□□ 0.02
DEFA4P12838 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.19■□□□□ 0.02
DEFA4P12838 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA4P12838 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms