Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.22■□□□□ 0.99
COL11A1P12107 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.22■□□□□ 0.99
COL11A1P12107 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL11A1P12107 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.22■□□□□ 0.99
COL11A1P12107 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
COL11A1P12107 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.22■□□□□ 0.99
COL11A1P12107 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.22■□□□□ 0.99
COL11A1P12107 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL11A1P12107 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
COL11A1P12107 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.22■□□□□ 0.99
COL11A1P12107 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
COL11A1P12107 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.22■□□□□ 0.99
COL11A1P12107 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL11A1P12107 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL11A1P12107 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
COL11A1P12107 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
COL11A1P12107 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.22■□□□□ 0.99
COL11A1P12107 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL11A1P12107 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
COL11A1P12107 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL11A1P12107 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
COL11A1P12107 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL11A1P12107 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
COL11A1P12107 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.21■□□□□ 0.99
COL11A1P12107 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL11A1P12107 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL11A1P12107 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL11A1P12107 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.21■□□□□ 0.99
COL11A1P12107 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL11A1P12107 MIR3180-4-201ENST00000582223 153 ntBASIC21.21■□□□□ 0.99
COL11A1P12107 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.21■□□□□ 0.99
COL11A1P12107 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL11A1P12107 AC124864.1-201ENST00000623408 392 ntBASIC21.21■□□□□ 0.99
COL11A1P12107 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL11A1P12107 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
COL11A1P12107 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
COL11A1P12107 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL11A1P12107 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
COL11A1P12107 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
COL11A1P12107 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL11A1P12107 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL11A1P12107 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.2■□□□□ 0.98
COL11A1P12107 KRT18P31-201ENST00000506277 1292 ntBASIC21.2■□□□□ 0.98
COL11A1P12107 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
COL11A1P12107 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL11A1P12107 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.2■□□□□ 0.98
COL11A1P12107 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.2■□□□□ 0.98
COL11A1P12107 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.2■□□□□ 0.98
COL11A1P12107 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL11A1P12107 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.2■□□□□ 0.98
COL11A1P12107 AC073130.3-201ENST00000624389 2278 ntBASIC21.2■□□□□ 0.98
COL11A1P12107 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.2■□□□□ 0.98
COL11A1P12107 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
COL11A1P12107 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.2■□□□□ 0.98
COL11A1P12107 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL11A1P12107 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
COL11A1P12107 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL11A1P12107 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL11A1P12107 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL11A1P12107 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.2■□□□□ 0.98
COL11A1P12107 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.2■□□□□ 0.98
COL11A1P12107 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.2■□□□□ 0.98
COL11A1P12107 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
COL11A1P12107 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A1P12107 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.19■□□□□ 0.98
COL11A1P12107 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A1P12107 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A1P12107 NSUN5P1-202ENST00000421140 1535 ntBASIC21.19■□□□□ 0.98
COL11A1P12107 NSUN5P2-203ENST00000457352 1529 ntBASIC21.19■□□□□ 0.98
COL11A1P12107 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.19■□□□□ 0.98
COL11A1P12107 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A1P12107 AL845331.1-201ENST00000424978 1190 ntBASIC21.19■□□□□ 0.98
COL11A1P12107 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.19■□□□□ 0.98
COL11A1P12107 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A1P12107 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A1P12107 FOSL1P1-201ENST00000511041 816 ntBASIC21.19■□□□□ 0.98
COL11A1P12107 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.19■□□□□ 0.98
COL11A1P12107 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
COL11A1P12107 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A1P12107 AC004263.2-201ENST00000617183 678 ntBASIC21.19■□□□□ 0.98
COL11A1P12107 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
COL11A1P12107 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A1P12107 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A1P12107 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.19■□□□□ 0.98
COL11A1P12107 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL11A1P12107 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A1P12107 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
COL11A1P12107 AC009078.2-202ENST00000463353 338 ntBASIC21.18■□□□□ 0.98
COL11A1P12107 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.18■□□□□ 0.98
COL11A1P12107 AC009065.1-201ENST00000564055 1225 ntBASIC21.18■□□□□ 0.98
COL11A1P12107 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A1P12107 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A1P12107 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A1P12107 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
COL11A1P12107 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A1P12107 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.18■□□□□ 0.98
COL11A1P12107 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A1P12107 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL11A1P12107 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
COL11A1P12107 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms